BibBase https://bibbase.org/zotero/upscpub
  2022 (105)
Controlling flowering of Medicago sativa (alfalfa) by inducing dominant mutations. Chiurazzi, M. J., Nørrevang, A. F., García, P., Cerdán, P. D., Palmgren, M., & Wenkel, S. Journal of Integrative Plant Biology, 64(2): 205–214. 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/jipb.13186
Controlling flowering of Medicago sativa (alfalfa) by inducing dominant mutations [link]Paper   doi   link   bibtex   abstract  
Stop CRYing! Inhibition of cryptochrome function by small proteins. Kruusvee, V., Toft, A. M., Aguida, B., Ahmad, M., & Wenkel, S. Biochemical Society Transactions, 50(2): 773–782. March 2022.
Stop CRYing! Inhibition of cryptochrome function by small proteins [link]Paper   doi   link   bibtex   abstract  
The genetic interaction of REVOLUTA and WRKY53 links plant development, senescence, and immune responses. Bresson, J., Doll, J., Vasseur, F., Stahl, M., Roepenack-Lahaye, E. v., Kilian, J., Stadelhofer, B., Kremer, J. M., Kolb, D., Wenkel, S., & Zentgraf, U. PLOS ONE, 17(3): e0254741. March 2022. Publisher: Public Library of Science
The genetic interaction of REVOLUTA and WRKY53 links plant development, senescence, and immune responses [link]Paper   doi   link   bibtex   abstract  
Microproteins — lost in translation. Kruusvee, V., & Wenkel, S. Nature Chemical Biology, 18(6): 581–582. June 2022. Number: 6 Publisher: Nature Publishing Group
Microproteins — lost in translation [link]Paper   doi   link   bibtex   abstract  
Context-specific functions of transcription factors controlling plant development: From leaves to flowers. Heisler, M. G., Jönsson, H., Wenkel, S., & Kaufmann, K. Current Opinion in Plant Biology, 69: 102262. October 2022.
Context-specific functions of transcription factors controlling plant development: From leaves to flowers [link]Paper   doi   link   bibtex   abstract  
FIONA1-mediated methylation of the 3’UTR of FLC affects FLC transcript levels and flowering in Arabidopsis. Sun, B., Bhati, K. K., Song, P., Edwards, A., Petri, L., Kruusvee, V., Blaakmeer, A., Dolde, U., Rodrigues, V., Straub, D., Yang, J., Jia, G., & Wenkel, S. PLOS Genetics, 18(9): e1010386. September 2022. Publisher: Public Library of Science
FIONA1-mediated methylation of the 3’UTR of FLC affects FLC transcript levels and flowering in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Species-specific transcriptional reprogramming during adventitious root initiation. Kidwai, M., Mishra, P., & Bellini, C. Trends in Plant Science. November 2022.
Species-specific transcriptional reprogramming during adventitious root initiation [link]Paper   doi   link   bibtex   abstract  
Hydraulic flux–responsive hormone redistribution determines root branching. Mehra, P., Pandey, B. K., Melebari, D., Banda, J., Leftley, N., Couvreur, V., Rowe, J., Anfang, M., De Gernier, H., Morris, E., Sturrock, C. J., Mooney, S. J., Swarup, R., Faulkner, C., Beeckman, T., Bhalerao, R. P., Shani, E., Jones, A. M., Dodd, I. C., Sharp, R. E., Sadanandom, A., Draye, X., & Bennett, M. J. Science, 378(6621): 762–768. November 2022. Publisher: American Association for the Advancement of Science
Hydraulic flux–responsive hormone redistribution determines root branching [link]Paper   doi   link   bibtex   abstract  
Cone-setting in spruce is regulated by conserved elements of the age-dependent flowering pathway. Akhter, S., Westrin, K. J., Zivi, N., Nordal, V., Kretzschmar, W. W., Delhomme, N., Street, N. R., Nilsson, O., Emanuelsson, O., & Sundström, J. F. New Phytologist, 236(5): 1951–1963. December 2022.
Cone-setting in spruce is regulated by conserved elements of the age-dependent flowering pathway [link]Paper   doi   link   bibtex   abstract  
Teasing apart the joint effect of demography and natural selection in the birth of a contact zone. Li, L., Milesi, P., Tiret, M., Chen, J., Sendrowski, J., Baison, J., Chen, Z., Zhou, L., Karlsson, B., Berlin, M., Westin, J., Garcia-Gil, M. R., Wu, H. X., & Lascoux, M. New Phytologist, 236(5): 1976–1987. December 2022.
Teasing apart the joint effect of demography and natural selection in the birth of a contact zone [link]Paper   doi   link   bibtex   abstract  
Regulation of PaRBOH1-mediated ROS production in Norway spruce by Ca2+ binding and phosphorylation. Nickolov, K., Gauthier, A., Hashimoto, K., Laitinen, T., Väisänen, E., Paasela, T., Soliymani, R., Kurusu, T., Himanen, K., Blokhina, O., Fagerstedt, K. V., Jokipii-Lukkari, S., Tuominen, H., Häggman, H., Wingsle, G., Teeri, T. H., Kuchitsu, K., & Kärkönen, A. Frontiers in Plant Science, 13. October 2022.
Regulation of PaRBOH1-mediated ROS production in Norway spruce by Ca2+ binding and phosphorylation [link]Paper   doi   link   bibtex   abstract  
Cytokinin signaling regulates two-stage inflorescence arrest in Arabidopsis. Walker, C. H, Ware, A., Šimura, J., Ljung, K., Wilson, Z., & Bennett, T. Plant Physiology,kiac514. November 2022.
Cytokinin signaling regulates two-stage inflorescence arrest in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
The human batokine EPDR1 regulates β-cell metabolism and function. Cataldo, L. R., Gao, Q., Argemi-Muntadas, L., Hodek, O., Cowan, E., Hladkou, S., Gheibi, S., Spégel, P., Prasad, R. B., Eliasson, L., Scheele, C., Fex, M., Mulder, H., & Moritz, T. Molecular Metabolism,101629. November 2022.
The human batokine EPDR1 regulates β-cell metabolism and function [link]Paper   doi   link   bibtex   abstract  
Accumulated effects of factors determining plant development from somatic embryos of Abies nordmanniana and Abies bornmuelleriana. Nielsen, U. B., Hansen, C. B., Hansen, U., Johansen, V. K., & Egertsdotter, U. Frontiers in Plant Science, 13. October 2022.
Accumulated effects of factors determining plant development from somatic embryos of Abies nordmanniana and Abies bornmuelleriana [link]Paper   link   bibtex   abstract  
Adaptive strategies of Scots pine under shade: increase in lignin synthesis and ecotypic variation in defence-related gene expression. Ranade, S. S., Seipel, G., Gorzsás, A., & García-Gil, M. R. Physiologia Plantarum, 2022-10: e13792. September 2022.
Adaptive strategies of Scots pine under shade: increase in lignin synthesis and ecotypic variation in defence-related gene expression [link]Paper   doi   link   bibtex   abstract  
IPT9, a cis-zeatin cytokinin biosynthesis gene, promotes root growth. Antoniadi, I., Mateo-Bonmatí, E., Pernisová, M., Brunoni, F., Antoniadi, M., Villalonga, M. G., Ament, A., Karády, M., Turnbull, C., Doležal, K., Pěnčík, A., Ljung, K., & Novák, O. Frontiers in Plant Science, 13. October 2022.
IPT9, a cis-zeatin cytokinin biosynthesis gene, promotes root growth [link]Paper   link   bibtex   abstract  
Taxol and β-tubulins from endophytic fungi isolated from the Himalayan Yew, Taxus wallichiana Zucc. Vélëz, H., Gauchan, D. P., & García-Gil, M. d. R. Frontiers in Microbiology, 13. October 2022.
Taxol and β-tubulins from endophytic fungi isolated from the Himalayan Yew, Taxus wallichiana Zucc. [link]Paper   link   bibtex   abstract  
Glyoxalase I activity affects Arabidopsis sensitivity to ammonium nutrition. Borysiuk, K., Ostaszewska-Bugajska, M., Kryzheuskaya, K., Gardeström, P., & Szal, B. Plant Cell Reports. October 2022.
Glyoxalase I activity affects Arabidopsis sensitivity to ammonium nutrition [link]Paper   doi   link   bibtex   abstract  
Soil Microbiome Influences on Seedling Establishment and Growth of Prosopis chilensis and Prosopis tamarugo from Northern Chile. Castro, D., Concha, C., Jamett, F., Ibáñez, C., & Hurry, V. Plants, 11(20): 2717. October 2022. Number: 20 Publisher: Multidisciplinary Digital Publishing Institute
Soil Microbiome Influences on Seedling Establishment and Growth of Prosopis chilensis and Prosopis tamarugo from Northern Chile [link]Paper   doi   link   bibtex   abstract  
Auxin triggers pectin modification during rootlet emergence in white lupin. Jobert, F., Soriano, A., Brottier, L., Casset, C., Divol, F., Safran, J., Lefebvre, V., Pelloux, J., Robert, S., & Péret, B. The Plant Journal. October 2022.
Auxin triggers pectin modification during rootlet emergence in white lupin [link]Paper   doi   link   bibtex   abstract  
SeedTransNet: A directional translational network revealing regulatory patterns during seed maturation and germination. Bai, B., Schiffthaler, B., van der Horst, S., Willems, L., Vergara, A., Karström, J., Mähler, N., Delhomme, N., Bentsink, L., & Hanson, J. Journal of Experimental Botany,erac394. October 2022.
SeedTransNet: A directional translational network revealing regulatory patterns during seed maturation and germination [link]Paper   doi   link   bibtex   abstract  
Aspen growth is not limited by starch reserves. Wang, W., Talide, L., Viljamaa, S., & Niittylä, T. Current Biology, 32(16): 3619–3627.e4. August 2022.
Aspen growth is not limited by starch reserves [link]Paper   doi   link   bibtex   abstract  
Characteristics of Cellulose Nanofibrils from Transgenic Trees with Reduced Expression of Cellulose Synthase Interacting 1. Jonasson, S., Bünder, A., Berglund, L., Niittylä, T., & Oksman, K. Nanomaterials, 12(19): 3448. October 2022. Number: 19 Publisher: Multidisciplinary Digital Publishing Institute
Characteristics of Cellulose Nanofibrils from Transgenic Trees with Reduced Expression of Cellulose Synthase Interacting 1 [link]Paper   doi   link   bibtex   abstract  
Laccaria bicolor pectin methylesterases are involved in ectomycorrhiza development with Populus tremula × Populus tremuloides. Chowdhury, J., Kemppainen, M., Delhomme, N., Shutava, I., Zhou, J., Takahashi, J., Pardo, A. G., & Lundberg-Felten, J. New Phytologist, 236(2): 639–655. October 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18358
Laccaria bicolor pectin methylesterases are involved in ectomycorrhiza development with Populus tremula × Populus tremuloides [link]Paper   doi   link   bibtex   abstract  
The RPN12a proteasome subunit is essential for the multiple hormonal homeostasis controlling the progression of leaf senescence. Boussardon, C., Bag, P., Juvany, M., Šimura, J., Ljung, K., Jansson, S., & Keech, O. Communications Biology, 5(1): 1–14. September 2022. Number: 1 Publisher: Nature Publishing Group
The RPN12a proteasome subunit is essential for the multiple hormonal homeostasis controlling the progression of leaf senescence [link]Paper   doi   link   bibtex   abstract  
The major trimeric antenna complexes serve as a site for qH-energy dissipation in plants. Bru, P., Steen, C. J., Park, S., Amstutz, C. L., Sylak-Glassman, E. J., Lam, L., Fekete, A., Mueller, M. J., Longoni, F., Fleming, G. R., Niyogi, K. K., & Malnoë, A. Journal of Biological Chemistry,102519. September 2022.
The major trimeric antenna complexes serve as a site for qH-energy dissipation in plants [link]Paper   doi   link   bibtex   abstract  
FLOWERING LOCUS T paralogs control the annual growth cycle in Populus trees. André, D., Marcon, A., Lee, K. C., Goretti, D., Zhang, B., Delhomme, N., Schmid, M., & Nilsson, O. Current Biology, 32(13): 2988–2996.e4. July 2022. Publisher: Elsevier
FLOWERING LOCUS T paralogs control the annual growth cycle in Populus trees [link]Paper   doi   link   bibtex   abstract  
Fluorescence activated cell sorting—A selective tool for plant cell isolation and analysis. Antoniadi, I., Skalický, V., Sun, G., Ma, W., Galbraith, D. W., Novák, O., & Ljung, K. Cytometry Part A, 101(9): 725–736. May 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1002/cyto.a.24461
Fluorescence activated cell sorting—A selective tool for plant cell isolation and analysis [link]Paper   doi   link   bibtex   abstract  
Genetic architecture behind developmental and seasonal control of tree growth and wood properties in Norway spruce. Chen, Z., Zan, Y., Zhou, L., Karlsson, B., Tuominen, H., García-Gil, M. R., & Wu, H. X. Frontiers in Plant Science, 13. August 2022.
Genetic architecture behind developmental and seasonal control of tree growth and wood properties in Norway spruce [link]Paper   link   bibtex   abstract  
Circum-Arctic distribution of chemical anti-herbivore compounds suggests biome-wide trade-off in defence strategies in Arctic shrubs. Lindén, E., te Beest, M., Aubreu, I., Moritz, T., Sundqvist, M. K., Barrio, I. C., Boike, J., Bryant, J. P., Bråthen, K. A., Buchwal, A., Bueno, C. G., Currier, A., Egelkraut, D. D., Forbes, B. C., Hallinger, M., Heijmans, M., Hermanutz, L., Hik, D. S., Hofgaard, A., Holmgren, M., Huebner, D. C., Høye, T. T., Jónsdóttir, I. S., Kaarlejärvi, E., Kissler, E., Kumpula, T., Limpens, J., Myers-Smith, I. H., Normand, S., Post, E., Rocha, A. V., Schmidt, N. M., Skarin, A., Soininen, E. M., Sokolov, A., Sokolova, N., Speed, J. D. M., Street, L., Tananaev, N., Tremblay, J., Urbanowicz, C., Watts, D. A., Zimmermann, H., & Olofsson, J. Ecography,e06166. August 2022.
Circum-Arctic distribution of chemical anti-herbivore compounds suggests biome-wide trade-off in defence strategies in Arctic shrubs [link]Paper   doi   link   bibtex   abstract  
The Plant trans-Golgi Network Component ECHIDNA Regulates Defense, Cell Death, and Endoplasmic Reticulum Stress. Liu, L., Qin, L., Safdar, L. B., Zhao, C., Cheng, X., Xie, M., Zhang, Y., Gao, F., Bai, Z., Huang, J., Bhalerao, R. P, Liu, S., & Wei, Y. Plant Physiology,kiac400. August 2022.
The Plant trans-Golgi Network Component ECHIDNA Regulates Defense, Cell Death, and Endoplasmic Reticulum Stress [link]Paper   doi   link   bibtex   abstract  
Effects of condensed tannins on behavior and performance of a specialist aphid on aspen. Rodríguez, B. D., Kloth, K. J., & Albrectsen, B. R. Ecology and Evolution, 12(8): e9229. 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1002/ece3.9229
Effects of condensed tannins on behavior and performance of a specialist aphid on aspen [link]Paper   doi   link   bibtex   abstract  
PIF7 is a master regulator of thermomorphogenesis in shade. Burko, Y., Willige, B. C., Seluzicki, A., Novák, O., Ljung, K., & Chory, J. Nature Communications, 13(1): 4942. August 2022. Number: 1 Publisher: Nature Publishing Group
PIF7 is a master regulator of thermomorphogenesis in shade [link]Paper   doi   link   bibtex   abstract  
Identification of growth regulators using cross-species network analysis in plants. Curci, P. L., Zhang, J., Mähler, N., Seyfferth, C., Mannapperuma, C., Diels, T., Van Hautegem, T., Jonsen, D., Street, N., Hvidsten, T. R, Hertzberg, M., Nilsson, O., Inzé, D., Nelissen, H., & Vandepoele, K. Plant Physiology,kiac374. August 2022.
Identification of growth regulators using cross-species network analysis in plants [link]Paper   doi   link   bibtex   abstract  
Enhanced lignin synthesis and ecotypic variation in defense-related gene expression in response to shade in Norway spruce. Ranade, S. S., Seipel, G., Gorzsás, A., & García-Gil, M. R. Plant, Cell & Environment, 45(9): 2671–2681. 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.14387
Enhanced lignin synthesis and ecotypic variation in defense-related gene expression in response to shade in Norway spruce [link]Paper   doi   link   bibtex   abstract  
Single, but not dual, attack by a biotrophic pathogen and a sap-sucking insect affects the oak leaf metabolome. van Dijk, L. J. A., Regazzoni, E. D. E., Albrectsen, B. R., Ehrlén, J., Abdelfattah, A., Stenlund, H., Pawlowski, K., & Tack, A. J. M. Frontiers in Plant Science, 13. August 2022.
Single, but not dual, attack by a biotrophic pathogen and a sap-sucking insect affects the oak leaf metabolome [link]Paper   link   bibtex   abstract  
Metabolic control of arginine and ornithine levels paces the progression of leaf senescence. Liebsch, D., Juvany, M., Li, Z., Wang, H., Ziolkowska, A., Chrobok, D., Boussardon, C., Wen, X., Law, S. R, Janečková, H., Brouwer, B., Lindén, P., Delhomme, N., Stenlund, H., Moritz, T., Gardeström, P., Guo, H., & Keech, O. Plant Physiology, 189(4): 1943–1960. August 2022.
Metabolic control of arginine and ornithine levels paces the progression of leaf senescence [link]Paper   doi   link   bibtex   abstract  
Transcriptome Meta-Analysis Identifies Candidate Hub Genes and Pathways of Pathogen Stress Responses in Arabidopsis thaliana. Biniaz, Y., Tahmasebi, A., Tahmasebi, A., Albrectsen, B. R., Poczai, P., & Afsharifar, A. Biology, 11(8): 1155. August 2022. Number: 8 Publisher: Multidisciplinary Digital Publishing Institute
Transcriptome Meta-Analysis Identifies Candidate Hub Genes and Pathways of Pathogen Stress Responses in Arabidopsis thaliana [link]Paper   doi   link   bibtex   abstract  
Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH. Yu, G., Hao, J., Pan, X., Shi, L., Zhang, Y., Wang, J., Fan, H., Xiao, Y., Yang, F., Lou, J., Chang, W., Malnoë, A., & Li, M. Nature Plants, 8(7): 840–855. July 2022. Number: 7 Publisher: Nature Publishing Group
Structure of Arabidopsis SOQ1 lumenal region unveils C-terminal domain essential for negative regulation of photoprotective qH [link]Paper   doi   link   bibtex   abstract  
Comparative structural analysis provides new insights into the function of R2-like ligand-binding oxidase. Diamanti, R., Srinivas, V., Johansson, A. I., Nordström, A., Griese, J. J., Lebrette, H., & Högbom, M. FEBS Letters, 596(12): 1600–1610. 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1002/1873-3468.14319
Comparative structural analysis provides new insights into the function of R2-like ligand-binding oxidase [link]Paper   doi   link   bibtex   abstract  
Molecular basis of differential adventitious rooting competence in poplar genotypes. Ranjan, A., Perrone, I., Alallaq, S., Singh, R., Rigal, A., Brunoni, F., Chitarra, W., Guinet, F., Kohler, A., Martin, F., Street, N. R, Bhalerao, R., Legué, V., & Bellini, C. Journal of Experimental Botany, 73(12): 4046–4064. June 2022.
Molecular basis of differential adventitious rooting competence in poplar genotypes [link]Paper   doi   link   bibtex   abstract  
Nitrate fertilization may delay autumn leaf senescence, while amino acid treatments do not. Fataftah, N., Edlund, E., Lihavainen, J., Bag, P., Björkén, L., Näsholm, T., & Jansson, S. Physiologia Plantarum, 174(3): e13690. 2022. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/ppl.13690
Nitrate fertilization may delay autumn leaf senescence, while amino acid treatments do not [link]Paper   doi   link   bibtex   abstract  
A kaleidoscope of photosynthetic antenna proteins and their emerging roles. Arshad, R., Saccon, F., Bag, P., Biswas, A., Calvaruso, C., Bhatti, A. F., Grebe, S., Mascoli, V., Mahbub, M., Muzzopappa, F., Polyzois, A., Schiphorst, C., Sorrentino, M., Streckaité, S., van Amerongen, H., Aro, E., Bassi, R., Boekema, E. J., Croce, R., Dekker, J., van Grondelle, R., Jansson, S., Kirilovsky, D., Kouřil, R., Michel, S., Mullineaux, C. W., Panzarová, K., Robert, B., Ruban, A. V., van Stokkum, I., Wientjes, E., & Büchel, C. Plant Physiology, 189(3): 1204–1219. June 2022.
doi   link   bibtex   abstract  
The carbon sequestration response of aboveground biomass and soils to nutrient enrichment in boreal forests depends on baseline site productivity. Blaško, R., Forsmark, B., Gundale, M. J., Lim, H., Lundmark, T., & Nordin, A. Science of The Total Environment, 838: 156327. September 2022.
The carbon sequestration response of aboveground biomass and soils to nutrient enrichment in boreal forests depends on baseline site productivity [link]Paper   doi   link   bibtex   abstract  
Effects of Magnesium, Pyrophosphate and Phosphonates on Pyrophosphorolytic Reaction of UDP-Glucose Pyrophosphorylase. Kleczkowski, L. A., & Decker, D. Plants, 11(12): 1611. June 2022. Number: 12 Publisher: Multidisciplinary Digital Publishing Institute
Effects of Magnesium, Pyrophosphate and Phosphonates on Pyrophosphorolytic Reaction of UDP-Glucose Pyrophosphorylase [link]Paper   doi   link   bibtex   abstract  
Managing existing forests can mitigate climate change. Kauppi, P. E., Stål, G., Arnesson-Ceder, L., Hallberg Sramek, I., Hoen, H. F., Svensson, A., Wernick, I. K., Högberg, P., Lundmark, T., & Nordin, A. Forest Ecology and Management, 513: 120186. June 2022.
Managing existing forests can mitigate climate change [link]Paper   doi   link   bibtex   abstract  
Metatranscriptomics captures dynamic shifts in mycorrhizal coordination in boreal forests. Law, S. R., Serrano, A. R., Daguerre, Y., Sundh, J., Schneider, A. N., Stangl, Z. R., Castro, D., Grabherr, M., Näsholm, T., Street, N. R., & Hurry, V. Proceedings of the National Academy of Sciences, 119(26): e2118852119. June 2022.
Metatranscriptomics captures dynamic shifts in mycorrhizal coordination in boreal forests [link]Paper   doi   link   bibtex   abstract  
Maturation and Assembly of Iron-Sulfur Cluster-Containing Subunits in the Mitochondrial Complex I From Plants. López-López, A., Keech, O., & Rouhier, N. Frontiers in Plant Science, 13. May 2022.
Maturation and Assembly of Iron-Sulfur Cluster-Containing Subunits in the Mitochondrial Complex I From Plants [link]Paper   link   bibtex   abstract  
Winter dormancy in trees. Nilsson, O. Current Biology, 32(12): R630–R634. June 2022.
Winter dormancy in trees [link]Paper   doi   link   bibtex   abstract  
Impaired KIN10 function restores developmental defects in the Arabidopsis trehalose 6-phosphate synthase1 (tps1) mutant. Zacharaki, V., Ponnu, J., Crepin, N., Langenecker, T., Hagmann, J., Skorzinski, N., Musialak-Lange, M., Wahl, V., Rolland, F., & Schmid, M. New Phytologist, 235(1): 220–233. 2022.
Impaired KIN10 function restores developmental defects in the Arabidopsis trehalose 6-phosphate synthase1 (tps1) mutant [link]Paper   doi   link   bibtex   abstract  
Sucrose synthase activity is not required for cellulose biosynthesis in Arabidopsis. Wang, W., Viljamaa, S., Hodek, O., Moritz, T., & Niittylä, T. The Plant Journal, 110(5): 1493–1497. 2022.
Sucrose synthase activity is not required for cellulose biosynthesis in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
CAGEs are Golgi-localized GT31 enzymes involved in cellulose biosynthesis in Arabidopsis. Nibbering, P., Castilleux, R., Wingsle, G., & Niittylä, T. The Plant Journal, 110(5): 1271–1285. 2022.
CAGEs are Golgi-localized GT31 enzymes involved in cellulose biosynthesis in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Nitrogen represses haustoria formation through abscisic acid in the parasitic plant Phtheirospermum japonicum. Kokla, A., Leso, M., Zhang, X., Simura, J., Serivichyaswat, P. T., Cui, S., Ljung, K., Yoshida, S., & Melnyk, C. W. Nature Communications, 13(1): 2976. May 2022.
Nitrogen represses haustoria formation through abscisic acid in the parasitic plant Phtheirospermum japonicum [link]Paper   doi   link   bibtex   abstract  
Arabidopsis RNA processing body components LSM1 and DCP5 aid in the evasion of translational repression during Cauliflower mosaic virus infection. Hoffmann, G., Mahboubi, A., Bente, H., Garcia, D., Hanson, J., & Hafrén, A. The Plant Cell,koac132. May 2022.
doi   link   bibtex   abstract  
GENOMES UNCOUPLED1 plays a key role during the de-etiolation process in Arabidopsis. Hernández-Verdeja, T., Vuorijoki, L., Jin, X., Vergara, A., Dubreuil, C., & Strand, Å. New Phytologist, 235(1): 188–203. 2022.
GENOMES UNCOUPLED1 plays a key role during the de-etiolation process in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
KAI2 regulates seedling development by mediating light-induced remodelling of auxin transport. Hamon-Josse, M., Villaécija-Aguilar, J. A., Ljung, K., Leyser, O., Gutjahr, C., & Bennett, T. New Phytologist, 235(1): 126–140. 2022.
KAI2 regulates seedling development by mediating light-induced remodelling of auxin transport [link]Paper   doi   link   bibtex   abstract  
Compensatory phenolic induction dynamics in aspen after aphid infestation. Gaur, R. K., de Abreu, I. N., & Albrectsen, B. R. Scientific Reports, 12(1): 9582. June 2022.
Compensatory phenolic induction dynamics in aspen after aphid infestation [link]Paper   doi   link   bibtex   abstract  
Sucrose synthases are not involved in starch synthesis in Arabidopsis leaves. Fünfgeld, M. M. F. F., Wang, W., Ishihara, H., Arrivault, S., Feil, R., Smith, A. M., Stitt, M., Lunn, J. E., & Niittylä, T. Nature Plants, 8(5): 574–582. May 2022.
Sucrose synthases are not involved in starch synthesis in Arabidopsis leaves [link]Paper   doi   link   bibtex   abstract  
Inactivation of the entire Arabidopsis group II GH3s confers tolerance to salinity and water deficit. Casanova-Sáez, R., Mateo-Bonmatí, E., Šimura, J., Pěnčík, A., Novák, O., & Ljung, K. New Phytologist, 235(1): 263–275. 2022.
Inactivation of the entire Arabidopsis group II GH3s confers tolerance to salinity and water deficit [link]Paper   doi   link   bibtex   abstract  
Combining metabolic phenotype determination with metabolomics and transcriptional analyses to reveal pathways regulated by hydroxycarboxylic acid receptor 2. Rabe, P., Gehmlich, M., Peters, A., Krumbholz, P., Nordström, A., & Stäubert, C. Discover Oncology, 13(1): 47. June 2022.
Combining metabolic phenotype determination with metabolomics and transcriptional analyses to reveal pathways regulated by hydroxycarboxylic acid receptor 2 [link]Paper   doi   link   bibtex   abstract  
Genetic diversity and background pollen contamination in Norway spruce and Scots pine seed orchard crops. Heuchel, A., Hall, D., Zhao, W., Gao, J., Wennström, U., Wang, X., Heuchel, A., Hall, D., Zhao, W., Gao, J., Wennström, U., & Wang, X. Forestry Research, 2(1): 1–12. June 2022.
Genetic diversity and background pollen contamination in Norway spruce and Scots pine seed orchard crops [link]Paper   doi   link   bibtex   abstract  
Natural variation in the long-distance transport of nutrients and photoassimilates in response to N availability. Chardon, F., De Marco, F., Marmagne, A., Le Hir, R., Vilaine, F., Bellini, C., & Dinant, S. Journal of Plant Physiology, 273: 153707. June 2022.
Natural variation in the long-distance transport of nutrients and photoassimilates in response to N availability [link]Paper   doi   link   bibtex   abstract  
DGAT1 activity synchronises with mitophagy to protect cells from metabolic rewiring by iron  depletion. Long, M., Sanchez-Martinez, A., Longo, M., Suomi, F., Stenlund, H., Johansson, A. I., Ehsan, H., Salo, V. T., Montava-Garriga, L., Naddafi, S., Ikonen, E., Ganley, I. G., Whitworth, A. J., & McWilliams, T. G. The EMBO Journal,e109390. April 2022.
DGAT1 activity synchronises with mitophagy to protect cells from metabolic rewiring by iron  depletion [link]Paper   doi   link   bibtex   abstract  
Plant cell walls as mechanical signaling hubs for morphogenesis. Jonsson, K., Hamant, O., & Bhalerao, R. P. Current Biology, 32(7): R334–R340. April 2022.
Plant cell walls as mechanical signaling hubs for morphogenesis [link]Paper   doi   link   bibtex   abstract  
Large-scale assessment of artificially coated seeds for forest regeneration across Sweden. Domevscik, M., Häggström, B., Lim, H., Öhlund, J., & Nordin, A. New Forests. May 2022.
Large-scale assessment of artificially coated seeds for forest regeneration across Sweden [link]Paper   doi   link   bibtex   abstract  
RNA Isolation from Nematode-Induced Feeding Sites in Arabidopsis RootsRoots Using Laser Capture Microdissection. Anjam, M. S., Siddique, S., & Marhavy, P. In Duque, P., & Szakonyi, D., editor(s), Environmental Responses in Plants: Methods and Protocols, of Methods in Molecular Biology, pages 313–324. Springer US, New York, NY, 2022.
RNA Isolation from Nematode-Induced Feeding Sites in Arabidopsis RootsRoots Using Laser Capture Microdissection [link]Paper   link   bibtex   abstract  
Bringing “Climate-Smart Forestry” Down to the Local Level—Identifying Barriers, Pathways and Indicators for Its Implementation in Practice. Hallberg-Sramek, I., Reimerson, E., Priebe, J., Nordström, E., Mårald, E., Sandström, C., & Nordin, A. Forests, 13(1): 98. January 2022.
Bringing “Climate-Smart Forestry” Down to the Local Level—Identifying Barriers, Pathways and Indicators for Its Implementation in Practice [link]Paper   doi   link   bibtex   abstract  
Katanin-Dependent Microtubule Ordering in Association with ABA Is Important for Root Hydrotropism. Miao, R., Siao, W., Zhang, N., Lei, Z., Lin, D., Bhalerao, R. P., Lu, C., & Xu, W. International Journal of Molecular Sciences, 23(7): 3846. January 2022.
Katanin-Dependent Microtubule Ordering in Association with ABA Is Important for Root Hydrotropism [link]Paper   doi   link   bibtex   abstract  
The Chinese pine genome and methylome unveil key features of conifer evolution. Niu, S., Li, J., Bo, W., Yang, W., Zuccolo, A., Giacomello, S., Chen, X., Han, F., Yang, J., Song, Y., Nie, Y., Zhou, B., Wang, P., Zuo, Q., Zhang, H., Ma, J., Wang, J., Wang, L., Zhu, Q., Zhao, H., Liu, Z., Zhang, X., Liu, T., Pei, S., Li, Z., Hu, Y., Yang, Y., Li, W., Zan, Y., Zhou, L., Lin, J., Yuan, T., Li, W., Li, Y., Wei, H., & Wu, H. X. Cell, 185(1): 204–217.e14. January 2022.
The Chinese pine genome and methylome unveil key features of conifer evolution [link]Paper   doi   link   bibtex   abstract  
CASP microdomain formation requires cross cell wall stabilization of domains and non-cell autonomous action of LOTR1. Kolbeck, A., Marhavý, P., De Bellis, D., Li, B., Kamiya, T., Fujiwara, T., Kalmbach, L., & Geldner, N. eLife, 11: e69602. January 2022.
CASP microdomain formation requires cross cell wall stabilization of domains and non-cell autonomous action of LOTR1 [link]Paper   doi   link   bibtex   abstract  
Mixed-mode chromatography-mass spectrometry enables targeted and untargeted screening of carboxylic acids in biological samples. Hodek, O., Argemi-Muntadas, L., Khan, A., & Moritz, T. Analytical Methods, 14(10): 1015–1022. January 2022.
Mixed-mode chromatography-mass spectrometry enables targeted and untargeted screening of carboxylic acids in biological samples [link]Paper   doi   link   bibtex   abstract  
Multiomics and digital monitoring during lifestyle changes reveal independent dimensions of human biology and health. Marabita, F., James, T., Karhu, A., Virtanen, H., Kettunen, K., Stenlund, H., Boulund, F., Hellström, C., Neiman, M., Mills, R., Perheentupa, T., Laivuori, H., Helkkula, P., Byrne, M., Jokinen, I., Honko, H., Kallonen, A., Ermes, M., Similä, H., Lindholm, M., Widén, E., Ripatti, S., Perälä-Heape, M., Engstrand, L., Nilsson, P., Moritz, T., Miettinen, T., Sallinen, R., & Kallioniemi, O. Cell Systems, 13(3): 241–255.e7. March 2022.
Multiomics and digital monitoring during lifestyle changes reveal independent dimensions of human biology and health [link]Paper   doi   link   bibtex  
Spatio-temporal regulation of lignification. Chantreau, M., & Tuominen, H. In Advances in Botanical Research. Academic Press, April 2022.
Spatio-temporal regulation of lignification [link]Paper   link   bibtex   abstract  
iP & OEIP – Cytokinin Micro Application Modulates Root Development with High Spatial Resolution. Pařízková, B., Antoniadi, I., Poxson, D. J., Karady, M., Simon, D. T., Zatloukal, M., Strnad, M., Doležal, K., Novák, O., & Ljung, K. Advanced Materials Technologies,2101664. April 2022.
iP & OEIP – Cytokinin Micro Application Modulates Root Development with High Spatial Resolution [link]Paper   doi   link   bibtex   abstract  
Auxin boosts energy generation pathways to fuel pollen maturation in barley. Amanda, D., Frey, F. P., Neumann, U., Przybyl, M., Šimura, J., Zhang, Y., Chen, Z., Gallavotti, A., Fernie, A. R., Ljung, K., & Acosta, I. F. Current Biology, 32(8): 1798–1811.e8. April 2022.
Auxin boosts energy generation pathways to fuel pollen maturation in barley [link]Paper   doi   link   bibtex   abstract  
LncRNA PMAT–PtoMYB46 module represses PtoMATE and PtoARF2 promoting Pb2+ uptake and plant growth in poplar. Chen, P., Song, Y., Liu, X., Xiao, L., Bu, C., Liu, P., Zhao, L., Ingvarsson, P. K., Wu, H. X., El-Kassaby, Y. A., & Zhang, D. Journal of Hazardous Materials, 433: 128769. July 2022.
LncRNA PMAT–PtoMYB46 module represses PtoMATE and PtoARF2 promoting Pb2+ uptake and plant growth in poplar [link]Paper   doi   link   bibtex   abstract  
Mobile forms of carbon in trees: metabolism and transport. Dominguez, P. G., & Niittylä, T. Tree Physiology, 42(3): 458–487. March 2022.
Mobile forms of carbon in trees: metabolism and transport [link]Paper   doi   link   bibtex   abstract  
The TGN/EE SNARE protein SYP61 and the ubiquitin ligase ATL31 cooperatively regulate plant responses to carbon/nitrogen conditions in Arabidopsis. Hasegawa, Y., Huarancca Reyes, T., Uemura, T., Baral, A., Fujimaki, A., Luo, Y., Morita, Y., Saeki, Y., Maekawa, S., Yasuda, S., Mukuta, K., Fukao, Y., Tanaka, K., Nakano, A., Takagi, J., Bhalerao, R. P, Yamaguchi, J., & Sato, T. The Plant Cell, 34(4): 1354–1374. April 2022.
The TGN/EE SNARE protein SYP61 and the ubiquitin ligase ATL31 cooperatively regulate plant responses to carbon/nitrogen conditions in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Genome-wide TCP transcription factors analysis provides insight into their new functions in seasonal and diurnal growth rhythm in Pinus tabuliformis. Nie, Y., Han, F., Ma, J., Chen, X., Song, Y., Niu, S., & Wu, H. X. BMC Plant Biology, 22(1): 167. April 2022.
Genome-wide TCP transcription factors analysis provides insight into their new functions in seasonal and diurnal growth rhythm in Pinus tabuliformis [link]Paper   doi   link   bibtex   abstract  
Demographic history and natural selection shape patterns of deleterious mutation load and barriers to introgression across Populus genome. Liu, S., Zhang, L., Sang, Y., Lai, Q., Zhang, X., Jia, C., Long, Z., Wu, J., Ma, T., Mao, K., Street, N. R, Ingvarsson, P. K, Liu, J., & Wang, J. Molecular Biology and Evolution, 39(2): msac008. January 2022.
Demographic history and natural selection shape patterns of deleterious mutation load and barriers to introgression across Populus genome [link]Paper   doi   link   bibtex   abstract  
A vacuolar hexose transport is required for xylem development in the inflorescence stem. Aubry, E., Hoffmann, B., Vilaine, F., Gilard, F., Klemens, P. A W, Guérard, F., Gakière, B., Neuhaus, H E., Bellini, C., Dinant, S., & Le Hir, R. Plant Physiology, 188(2): 1229–1247. February 2022.
A vacuolar hexose transport is required for xylem development in the inflorescence stem [link]Paper   doi   link   bibtex   abstract  
Protein lipoylation in mitochondria requires Fe–S cluster assembly factors NFU4 and NFU5. Przybyla-Toscano, J., Maclean, A. E, Franceschetti, M., Liebsch, D., Vignols, F., Keech, O., Rouhier, N., & Balk, J. Plant Physiology, 188(2): 997–1013. February 2022.
Protein lipoylation in mitochondria requires Fe–S cluster assembly factors NFU4 and NFU5 [link]Paper   doi   link   bibtex   abstract  
Characterising the mechanics of cell–cell adhesion in plants. Atakhani, A., Bogdziewiez, L., & Verger, S. Quantitative Plant Biology, 3. February 2022.
Characterising the mechanics of cell–cell adhesion in plants [link]Paper   doi   link   bibtex   abstract  
Impaired phosphocreatine metabolism in white adipocytes promotes inflammation. Maqdasy, S., Lecoutre, S., Renzi, G., Frendo-Cumbo, S., Rizo-Roca, D., Moritz, T., Juvany, M., Hodek, O., Gao, H., Couchet, M., Witting, M., Kerr, A., Bergo, M. O., Choudhury, R. P., Aouadi, M., Zierath, J. R., Krook, A., Mejhert, N., & Rydén, M. Nature Metabolism, 4(2): 1–13. February 2022.
Impaired phosphocreatine metabolism in white adipocytes promotes inflammation [link]Paper   doi   link   bibtex   abstract  
A transcriptome-based association study of growth, wood quality, and oleoresin traits in a slash pine breeding population. Ding, X., Diao, S., Luan, Q., Wu, H. X., Zhang, Y., & Jiang, J. PLOS Genetics, 18(2): e1010017. February 2022.
A transcriptome-based association study of growth, wood quality, and oleoresin traits in a slash pine breeding population [link]Paper   doi   link   bibtex   abstract  
MicroRNA and cDNA-Microarray as Potential Targets against Abiotic Stress Response in Plants: Advances and Prospects. Pervaiz, T., Amjid, M. W., El-kereamy, A., Niu, S., & Wu, H. X. Agronomy, 12(1): 11. January 2022.
MicroRNA and cDNA-Microarray as Potential Targets against Abiotic Stress Response in Plants: Advances and Prospects [link]Paper   doi   link   bibtex   abstract  
Timing is everything – obtaining accurate measures of plant uptake of amino acids. Svennerstam, H., & Jämtgård, S. New Phytologist, 234(1): 311–318. January 2022.
Timing is everything – obtaining accurate measures of plant uptake of amino acids [link]Paper   doi   link   bibtex   abstract  
Editorial: Advances on the Biological Mechanisms Involved in Adventitious Root Formation: From Signaling to Morphogenesis. Cardoso, H., Peixe, A., Bellini, C., Porfírio, S., & Druege, U. Frontiers in Plant Science, 13. 2022.
Editorial: Advances on the Biological Mechanisms Involved in Adventitious Root Formation: From Signaling to Morphogenesis [link]Paper   doi   link   bibtex  
Potassium transporter TRH1/KUP4 contributes to distinct auxin-mediated root system architecture responses. Templalexis, D., Tsitsekian, D., Liu, C., Daras, G., Šimura, J., Moschou, P., Ljung, K., Hatzopoulos, P., & Rigas, S. Plant Physiology, 188(2): 1043–1060. February 2022.
Potassium transporter TRH1/KUP4 contributes to distinct auxin-mediated root system architecture responses [link]Paper   doi   link   bibtex   abstract  
Populus SVL Acts in Leaves to Modulate the Timing of Growth Cessation and Bud Set. André, D., Zambrano, J. A., Zhang, B., Lee, K. C., Rühl, M., Marcon, A., & Nilsson, O. Frontiers in Plant Science, 13. February 2022.
Populus SVL Acts in Leaves to Modulate the Timing of Growth Cessation and Bud Set [link]Paper   doi   link   bibtex   abstract  
Cell biology of the leaf epidermis: Fate specification, morphogenesis, and coordination. Zuch, D. T, Doyle, S. M, Majda, M., Smith, R. S, Robert, S., & Torii, K. U The Plant Cell, 34(1): 209–227. January 2022.
Cell biology of the leaf epidermis: Fate specification, morphogenesis, and coordination [link]Paper   doi   link   bibtex   abstract  
Aspen Leaves as a “Chemical Landscape” for Fungal Endophyte Diversity—Effects of Nitrogen Addition. Witzell, J., Decker, V. H. G., Agostinelli, M., Romeralo, C., Cleary, M., & Albrectsen, B. R. Frontiers in Microbiology, 13. March 2022.
Aspen Leaves as a “Chemical Landscape” for Fungal Endophyte Diversity—Effects of Nitrogen Addition [link]Paper   doi   link   bibtex   abstract  
Optimization of Protocol for Construction of Fungal ITS Amplicon Library for High-Throughput Illumina Sequencing to Study the Mycobiome of Aspen Leaves. Siddique, A. B., Albrectsen, B. R., Ilbi, H., & Siddique, A. B. Applied Sciences, 12(3): 1136. January 2022.
Optimization of Protocol for Construction of Fungal ITS Amplicon Library for High-Throughput Illumina Sequencing to Study the Mycobiome of Aspen Leaves [link]Paper   doi   link   bibtex   abstract  
ZEITLUPE Promotes ABA-Induced Stomatal Closure in Arabidopsis and Populus. Jurca, M., Sjölander, J., Ibáñez, C., Matrosova, A., Johansson, M., Kozarewa, I., Takata, N., Bakó, L., Webb, A. A. R., Israelsson-Nordström, M., & Eriksson, M. E. Frontiers in Plant Science, 13. March 2022.
ZEITLUPE Promotes ABA-Induced Stomatal Closure in Arabidopsis and Populus [link]Paper   link   bibtex   abstract  
Norway spruce deploys tissue-specific responses during acclimation to cold. Vergara, A., Haas, J. C., Aro, T., Stachula, P., Street, N. R., & Hurry, V. Plant, Cell & Environment, 45(2). February 2022.
Norway spruce deploys tissue-specific responses during acclimation to cold [link]Paper   doi   link   bibtex   abstract  
To have or not to have: expression of amino acid transporters during pathogen infection. Tünnermann, L., Colou, J., Näsholm, T., & Gratz, R. Plant Molecular Biology. February 2022.
To have or not to have: expression of amino acid transporters during pathogen infection [link]Paper   doi   link   bibtex   abstract  
Transcriptome Analysis of an Aedes albopictus Cell Line Single- and Dual-Infected with Lammi Virus and WNV. Öhlund, P., Delhomme, N., Hayer, J., Hesson, J. C., & Blomström, A. International Journal of Molecular Sciences, 23(2): 875. January 2022.
Transcriptome Analysis of an Aedes albopictus Cell Line Single- and Dual-Infected with Lammi Virus and WNV [link]Paper   doi   link   bibtex   abstract  
The Perennial Clock Is an Essential Timer for Seasonal Growth Events and Cold Hardiness. Johansson, M., Ibáñez, C., Takata, N., & Eriksson, M. E. In Staiger, D., Davis, S., & Davis, A. M., editor(s), Plant Circadian Networks: Methods and Protocols, of Methods in Molecular Biology, pages 227–242. Springer US, New York, NY, January 2022.
The Perennial Clock Is an Essential Timer for Seasonal Growth Events and Cold Hardiness [link]Paper   link   bibtex   abstract  
Monitoring Seasonal Bud Set, Bud Burst, and Cold Hardiness in Populus. Johansson, M., Takata, N., Ibáñez, C., & Eriksson, M. E. In Staiger, D., Davis, S., & Davis, A. M., editor(s), Plant Circadian Networks: Methods and Protocols, of Methods in Molecular Biology, pages 215–226. Springer US, New York, NY, January 2022.
Monitoring Seasonal Bud Set, Bud Burst, and Cold Hardiness in Populus [link]Paper   link   bibtex   abstract  
The decreased PG content of pgp1 inhibits PSI photochemistry and limits reaction center and light-harvesting polypeptide accumulation in response to cold acclimation. Ivanov, A. G., Krol, M., Savitch, L. V., Szyszka-Mroz, B., Roche, J., Sprott, D. P., Selstam, E., Wilson, K. W., Gardiner, R., Öquist, G., Hurry, V. M., & Hüner, N. P. A. Planta, 255(2): 36. January 2022.
The decreased PG content of pgp1 inhibits PSI photochemistry and limits reaction center and light-harvesting polypeptide accumulation in response to cold acclimation [link]Paper   doi   link   bibtex   abstract  
Cell Type–Specific Isolation of Mitochondria in Arabidopsis. Boussardon, C., & Keech, O. In Van Aken, O., & Rasmusson, A. G., editor(s), Plant Mitochondria: Methods and Protocols, of Methods in Molecular Biology, pages 13–23. Springer US, New York, NY, January 2022.
Cell Type–Specific Isolation of Mitochondria in Arabidopsis [link]Paper   link   bibtex   abstract  
Towards understanding the biological foundations of perenniality. Li, Z., Lathe, R. S., Li, J., He, H., & Bhalerao, R. P. Trends in Plant Science, 27(1): 56–68. January 2022.
Towards understanding the biological foundations of perenniality [link]Paper   doi   link   bibtex   abstract  
Recent developments in the understanding of PIN polarity. Marhava, P. New Phytologist, 233(2): 624–630. January 2022.
Recent developments in the understanding of PIN polarity [link]Paper   doi   link   bibtex   abstract  
Hydroxycarboxylic acid receptor 3 and GPR84 – Two metabolite-sensing G protein-coupled receptors with opposing functions in innate immune cells. Peters, A., Rabe, P., Liebing, A., Krumbholz, P., Nordström, A., Jäger, E., Kraft, R., & Stäubert, C. Pharmacological Research, 176: 106047. February 2022.
Hydroxycarboxylic acid receptor 3 and GPR84 – Two metabolite-sensing G protein-coupled receptors with opposing functions in innate immune cells [link]Paper   doi   link   bibtex   abstract