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  2017 (105)
Dynamics of H3K4me3 Chromatin Marks Prevails over H3K27me3 for Gene Regulation during Flower Morphogenesis in Arabidopsis thaliana. Engelhorn, J., Blanvillain, R., Kröner, C., Parrinello, H., Rohmer, M., Posé, D., Ott, F., Schmid, M., & Carles, C. C. Epigenomes, 1(2): 8. September 2017. Number: 2 Publisher: Multidisciplinary Digital Publishing Institute
Dynamics of H3K4me3 Chromatin Marks Prevails over H3K27me3 for Gene Regulation during Flower Morphogenesis in Arabidopsis thaliana [link]Paper   doi   link   bibtex   abstract  
Two Complementary Mechanisms Underpin Cell Wall Patterning during Xylem Vessel Development. Schneider, R., Tang, L., Lampugnani, E. R., Barkwill, S., Lathe, R., Zhang, Y., McFarlane, H. E., Pesquet, E., Niittylä, T., Mansfield, S. D., Zhou, Y., & Persson, S. The Plant Cell, 29(10): 2433–2449. October 2017.
Two Complementary Mechanisms Underpin Cell Wall Patterning during Xylem Vessel Development [link]Paper   doi   link   bibtex  
XYLEM NAC DOMAIN1, an angiosperm NAC transcription factor, inhibits xylem differentiation through conserved motifs that interact with RETINOBLASTOMA‐RELATED. Zhao, C., Lasses, T., Bakó, L., Kong, D., Zhao, B., Chanda, B., Bombarely, A., Cruz‐Ramírez, A., Scheres, B., Brunner, A. M., & Beers, E. P. New Phytologist, 216(1): 76–89. October 2017.
XYLEM NAC DOMAIN1, an angiosperm NAC transcription factor, inhibits xylem differentiation through conserved motifs that interact with RETINOBLASTOMA‐RELATED [link]Paper   doi   link   bibtex  
Fertility Variation, Genetic Relatedness, and Their Impacts on Gene Diversity of Seeds From a Seed Orchard of Pinus thunbergii. Mullin, U. Silvae Genetica, 53(1-6): 202–206. October 2017.
Fertility Variation, Genetic Relatedness, and Their Impacts on Gene Diversity of Seeds From a Seed Orchard of Pinus thunbergii [link]Paper   doi   link   bibtex   abstract  
Fertility Variation and its Implications on Relatedness in Seed Crops in Seedling Seed Orchards of Eucalyptus camaldulensis and E. tereticornis. Lindgren, D. Silvae Genetica, 56(1-6): 253–259. October 2017.
Fertility Variation and its Implications on Relatedness in Seed Crops in Seedling Seed Orchards of Eucalyptus camaldulensis and E. tereticornis [link]Paper   doi   link   bibtex   abstract  
WUSCHEL-RELATED HOMEOBOX4 (WOX4)-like genes regulate cambial cell division activity and secondary growth in Populus trees. Kucukoglu, M., Nilsson, J., Zheng, B., Chaabouni, S., & Nilsson, O. New Phytologist, 215(2): 642–657. 2017. _eprint: https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.14631
WUSCHEL-RELATED HOMEOBOX4 (WOX4)-like genes regulate cambial cell division activity and secondary growth in Populus trees [link]Paper   doi   link   bibtex   abstract  
Inbreeding in Pinus Radiata – V. The Effects of Inbreeding on Fecundity. Matheson, U. Silvae Genetica, 53(1-6): 80–88. October 2017.
Inbreeding in Pinus Radiata – V. The Effects of Inbreeding on Fecundity [link]Paper   doi   link   bibtex   abstract  
Strategies for Optimal Deployment of Related Clones into Seed Orchards. Lindgren, D. Silvae Genetica, 57(1-6): 119–127. October 2017.
Strategies for Optimal Deployment of Related Clones into Seed Orchards [link]Paper   doi   link   bibtex   abstract  
Inheritance and Genetic Gain in Wood Stiffness in Radiata Pine Assessed Acoustically in Young Standing Trees. Wu, H. X. Silvae Genetica, 57(1-6): 56–64. October 2017.
Inheritance and Genetic Gain in Wood Stiffness in Radiata Pine Assessed Acoustically in Young Standing Trees [link]Paper   doi   link   bibtex   abstract  
Evaluation of Pollen Contamination in an Advanced Scots Pine Seed Orchard. Lindgren, D. Silvae Genetica, 58(1-6): 262–269. October 2017.
Evaluation of Pollen Contamination in an Advanced Scots Pine Seed Orchard [link]Paper   doi   link   bibtex   abstract  
Annual Fertility Variation in Clonal Seed Orchards of Teak (Tectona grandis L.f.) and its Impact on Seed Crop. Lindgren, D. Silvae Genetica, 58(1-6): 85–93. October 2017.
Annual Fertility Variation in Clonal Seed Orchards of Teak (Tectona grandis L.f.) and its Impact on Seed Crop [link]Paper   doi   link   bibtex   abstract  
Estimation of Clonal Variation in Seed Cone Production Over Time in a Scots pine (Pinus sylvestris L.) Seed Orchard. Mullin, T. J. Silvae Genetica, 58(1-6): 53–62. October 2017.
Estimation of Clonal Variation in Seed Cone Production Over Time in a Scots pine (Pinus sylvestris L.) Seed Orchard [link]Paper   doi   link   bibtex   abstract  
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch. Salojärvi, J., Smolander, O., Nieminen, K., Rajaraman, S., Safronov, O., Safdari, P., Lamminmäki, A., Immanen, J., Lan, T., Tanskanen, J., Rastas, P., Amiryousefi, A., Jayaprakash, B., Kammonen, J. I, Hagqvist, R., Eswaran, G., Ahonen, V. H., Serra, J. A., Asiegbu, F. O, de Dios Barajas-Lopez, J., Blande, D., Blokhina, O., Blomster, T., Broholm, S., Brosché, M., Cui, F., Dardick, C., Ehonen, S. E, Elomaa, P., Escamez, S., Fagerstedt, K. V, Fujii, H., Gauthier, A., Gollan, P. J, Halimaa, P., Heino, P. I, Himanen, K., Hollender, C., Kangasjärvi, S., Kauppinen, L., Kelleher, C. T, Kontunen-Soppela, S., Koskinen, J P., Kovalchuk, A., Kärenlampi, S. O, Kärkönen, A. K, Lim, K., Leppälä, J., Macpherson, L., Mikola, J., Mouhu, K., Mähönen, A. P., Niinemets, Ü., Oksanen, E., Overmyer, K., Palva, E T., Pazouki, L., Pennanen, V., Puhakainen, T., Poczai, P., Possen, B. J H M, Punkkinen, M., Rahikainen, M. M, Rousi, M., Ruonala, R., van der Schoot, C., Shapiguzov, A., Sierla, M., Sipilä, T. P, Sutela, S., Teeri, T. H, Tervahauta, A. I, Vaattovaara, A., Vahala, J., Vetchinnikova, L., Welling, A., Wrzaczek, M., Xu, E., Paulin, L. G, Schulman, A. H, Lascoux, M., Albert, V. A, Auvinen, P., Helariutta, Y., & Kangasjärvi, J. Nature Genetics, 49(6): 904–912. June 2017.
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch [link]Paper   doi   link   bibtex   abstract  
Photoperiod- and temperature-mediated control of growth cessation and dormancy in trees: a molecular perspective. Maurya, J. P., & Bhalerao, R. P. Annals of Botany, 120(3): 351–360. September 2017.
doi   link   bibtex   abstract  
Spatially resolved metabolic analysis reveals a central role for transcriptional control in carbon allocation to wood. Roach, M., Arrivault, S., Mahboubi, A., Krohn, N., Sulpice, R., Stitt, M., & Niittylä, T. Journal of Experimental Botany, 68(13): 3529–3539. June 2017.
Spatially resolved metabolic analysis reveals a central role for transcriptional control in carbon allocation to wood [link]Paper   doi   link   bibtex  
AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula. Sundell, D., Street, N. R., Kumar, M., Mellerowicz, E. J., Kucukoglu, M., Johnsson, C., Kumar, V., Mannapperuma, C., Delhomme, N., Nilsson, O., Tuominen, H., Pesquet, E., Fischer, U., Niittylä, T., Sundberg, B., & Hvidsten, T. R. The Plant Cell, 29(7): 1585–1604. July 2017.
AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in <i>Populus tremula</i> [link]Paper   doi   link   bibtex  
A Key Role for Apoplastic H $_{\textrm{2}}$ O $_{\textrm{2}}$ in Norway Spruce Phenolic Metabolism. Laitinen, T., Morreel, K., Delhomme, N., Gauthier, A., Schiffthaler, B., Nickolov, K., Brader, G., Lim, K., Teeri, T. H., Street, N. R., Boerjan, W., & Kärkönen, A. Plant Physiology, 174(3): 1449–1475. July 2017.
A Key Role for Apoplastic H $_{\textrm{2}}$ O $_{\textrm{2}}$ in Norway Spruce Phenolic Metabolism [link]Paper   doi   link   bibtex  
Evaluating the accuracy of genomic prediction of growth and wood traits in two Eucalyptus species and their F1 hybrids. Tan, B., Grattapaglia, D., Martins, G. S., Ferreira, K. Z., Sundberg, B., & Ingvarsson, P. K. BMC Plant Biology, 17(1): 110. December 2017.
Evaluating the accuracy of genomic prediction of growth and wood traits in two Eucalyptus species and their F1 hybrids [link]Paper   doi   link   bibtex  
Evaluation of a New Temporary Immersion Bioreactor System for Micropropagation of Cultivars of Eucalyptus, Birch and Fir. Businge, E., Trifonova, A., Schneider, C., Rödel, P., & Egertsdotter, U. Forests, 8(6): 196. June 2017.
Evaluation of a New Temporary Immersion Bioreactor System for Micropropagation of Cultivars of Eucalyptus, Birch and Fir [link]Paper   doi   link   bibtex  
The retraction of the protoplast during PCD is an active, and interruptible, calcium-flux driven process. Kacprzyk, J., Brogan, N. P., Daly, C. T., Doyle, S. M., Diamond, M., Molony, E. M., & McCabe, P. F. Plant Science, 260: 50–59. July 2017.
The retraction of the protoplast during PCD is an active, and interruptible, calcium-flux driven process [link]Paper   doi   link   bibtex  
Nitrogen enrichment impacts on boreal litter decomposition are driven by changes in soil microbiota rather than litter quality. Maaroufi, N. I., Nordin, A., Palmqvist, K., & Gundale, M. J. Scientific Reports, 7(1): 4083. December 2017.
Nitrogen enrichment impacts on boreal litter decomposition are driven by changes in soil microbiota rather than litter quality [link]Paper   doi   link   bibtex  
Damage by pathogens and insects to Scots pine and lodgepole pine 25 years after reciprocal plantings in Canada and Sweden. Fries, A. Scandinavian Journal of Forest Research, 32(6): 459–472. August 2017.
Damage by pathogens and insects to Scots pine and lodgepole pine 25 years after reciprocal plantings in Canada and Sweden [link]Paper   doi   link   bibtex  
Metacaspases versus caspases in development and cell fate regulation. Minina, E A, Coll, N S, Tuominen, H, & Bozhkov, P V Cell Death & Differentiation, 24(8): 1314–1325. August 2017.
Metacaspases versus caspases in development and cell fate regulation [link]Paper   doi   link   bibtex  
Functional metabolomics as a tool to analyze Mediator function and structure in plants. Davoine, C., Abreu, I. N., Khajeh, K., Blomberg, J., Kidd, B. N., Kazan, K., Schenk, P. M., Gerber, L., Nilsson, O., Moritz, T., & Björklund, S. PLOS ONE, 12(6): e0179640. June 2017.
Functional metabolomics as a tool to analyze Mediator function and structure in plants [link]Paper   doi   link   bibtex  
BLADE-ON-PETIOLE proteins act in an E3 ubiquitin ligase complex to regulate PHYTOCHROME INTERACTING FACTOR 4 abundance. Zhang, B., Holmlund, M., Lorrain, S., Norberg, M., Bakó, L., Fankhauser, C., & Nilsson, O. eLife, 6: e26759. August 2017.
BLADE-ON-PETIOLE proteins act in an E3 ubiquitin ligase complex to regulate PHYTOCHROME INTERACTING FACTOR 4 abundance [link]Paper   doi   link   bibtex   abstract  
Auxin minimum triggers the developmental switch from cell division to cell differentiation in the Arabidopsis root. Di Mambro, R., De Ruvo, M., Pacifici, E., Salvi, E., Sozzani, R., Benfey, P. N., Busch, W., Novak, O., Ljung, K., Di Paola, L., Marée, A. F. M., Costantino, P., Grieneisen, V. A., & Sabatini, S. Proceedings of the National Academy of Sciences, 114(36): E7641–E7649. September 2017.
Auxin minimum triggers the developmental switch from cell division to cell differentiation in the <i>Arabidopsis</i> root [link]Paper   doi   link   bibtex   abstract  
Nitrogen uptake and assimilation in proliferating embryogenic cultures of Norway spruce—Investigating the specific role of glutamine. Carlsson, J., Svennerstam, H., Moritz, T., Egertsdotter, U., & Ganeteg, U. PLOS ONE, 12(8): e0181785. August 2017.
Nitrogen uptake and assimilation in proliferating embryogenic cultures of Norway spruce—Investigating the specific role of glutamine [link]Paper   doi   link   bibtex  
Substrate Specificity and Inhibitor Sensitivity of Plant UDP-Sugar Producing Pyrophosphorylases. Decker, D., & Kleczkowski, L. A. Frontiers in Plant Science, 8: 1610. September 2017.
Substrate Specificity and Inhibitor Sensitivity of Plant UDP-Sugar Producing Pyrophosphorylases [link]Paper   doi   link   bibtex  
Genetic analysis of lodgepole pine ( Pinus contorta ) solid-wood quality traits. Hayatgheibi, H., Fries, A., Kroon, J., & Wu, H. X. Canadian Journal of Forest Research, 47(10): 1303–1313. October 2017.
Genetic analysis of lodgepole pine ( <i>Pinus contorta</i> ) solid-wood quality traits [link]Paper   doi   link   bibtex   abstract  
Differentially expressed genes during the imbibition of dormant and after-ripened seeds – a reverse genetics approach. Yazdanpanah, F., Hanson, J., Hilhorst, H. W., & Bentsink, L. BMC Plant Biology, 17(1): 151. December 2017.
Differentially expressed genes during the imbibition of dormant and after-ripened seeds – a reverse genetics approach [link]Paper   doi   link   bibtex  
Enhanced Secondary- and Hormone Metabolism in Leaves of Arbuscular Mycorrhizal Medicago truncatula. Adolfsson, L., Nziengui, H., Abreu, I. N, Šimura, J., Beebo, A., Herdean, A., Aboalizadeh, J., Široká, J., Moritz, T., Novák, O., Ljung, K., Schoefs, B., & Spetea, C. Plant Physiology, 175(1): 392–411. September 2017.
Enhanced Secondary- and Hormone Metabolism in Leaves of Arbuscular Mycorrhizal <i>Medicago truncatula</i> [link]Paper   doi   link   bibtex  
Brassinosteroid signaling-dependent root responses to prolonged elevated ambient temperature. Martins, S., Montiel-Jorda, A., Cayrel, A., Huguet, S., Roux, C. P., Ljung, K., & Vert, G. Nature Communications, 8(1): 309. December 2017.
Brassinosteroid signaling-dependent root responses to prolonged elevated ambient temperature [link]Paper   doi   link   bibtex  
SIEVE ELEMENT-LINING CHAPERONE1 Restricts Aphid Feeding on Arabidopsis during Heat Stress. Kloth, K. J., Busscher-Lange, J., Wiegers, G. L., Kruijer, W., Buijs, G., Meyer, R. C., Albrectsen, B. R., Bouwmeester, H. J., Dicke, M., & Jongsma, M. A. The Plant Cell, 29(10): 2450–2464. October 2017.
SIEVE ELEMENT-LINING CHAPERONE1 Restricts Aphid Feeding on Arabidopsis during Heat Stress [link]Paper   doi   link   bibtex  
Arabidopsis BTB/POZ protein-dependent PENETRATION3 trafficking and disease susceptibility. Mao, H., Aryal, B., Langenecker, T., Hagmann, J., Geisler, M., & Grebe, M. Nature Plants, 3(11): 854–858. November 2017.
Arabidopsis BTB/POZ protein-dependent PENETRATION3 trafficking and disease susceptibility [link]Paper   doi   link   bibtex  
Contribution of major FLM isoforms to temperature-dependent flowering in Arabidopsis thaliana. Capovilla, G., Symeonidi, E., Wu, R., & Schmid, M. Journal of Experimental Botany, 68(18): 5117–5127. November 2017.
Contribution of major FLM isoforms to temperature-dependent flowering in Arabidopsis thaliana [link]Paper   doi   link   bibtex  
Incorporating mass flow strongly promotes N flux rates in boreal forest soils. Oyewole, O. A., Inselsbacher, E., Näsholm, T., & Jämtgård, S. Soil Biology and Biochemistry, 114: 263–269. November 2017.
Incorporating mass flow strongly promotes N flux rates in boreal forest soils [link]Paper   doi   link   bibtex  
Mechanochemical Polarization of Contiguous Cell Walls Shapes Plant Pavement Cells. Majda, M., Grones, P., Sintorn, I., Vain, T., Milani, P., Krupinski, P., Zagórska-Marek, B., Viotti, C., Jönsson, H., Mellerowicz, E. J., Hamant, O., & Robert, S. Developmental Cell, 43(3): 290–304.e4. November 2017.
Mechanochemical Polarization of Contiguous Cell Walls Shapes Plant Pavement Cells [link]Paper   doi   link   bibtex  
Genetic variation in resistance of Norway spruce seedlings to damage by the pine weevil Hylobius abietis. Zas, R., Björklund, N., Sampedro, L., Hellqvist, C., Karlsson, B., Jansson, S., & Nordlander, G. Tree Genetics & Genomes, 13(5): 111. October 2017.
Genetic variation in resistance of Norway spruce seedlings to damage by the pine weevil Hylobius abietis [link]Paper   doi   link   bibtex  
Metabolome and transcriptome profiling reveal new insights into somatic embryo germination in Norway spruce (Picea abies). Dobrowolska, I., Businge, E., Abreu, I. N, Moritz, T., & Egertsdotter, U. Tree Physiology, 37(12): 1752–1766. December 2017.
Metabolome and transcriptome profiling reveal new insights into somatic embryo germination in Norway spruce (Picea abies) [link]Paper   doi   link   bibtex  
Improving in situ recovery of soil nitrogen using the microdialysis technique. Buckley, S., Brackin, R., Näsholm, T., Schmidt, S., & Jämtgård, S. Soil Biology and Biochemistry, 114: 93–103. November 2017.
Improving in situ recovery of soil nitrogen using the microdialysis technique [link]Paper   doi   link   bibtex  
Forest future s by Swedish students – developing a mind mapping method for data collection. Nummelin, T., Widmark, C., Riala, M., Sténs, A., Nordström, E., & Nordin, A. Scandinavian Journal of Forest Research, 32(8): 807–817. November 2017.
Forest future s by Swedish students – developing a mind mapping method for data collection [link]Paper   doi   link   bibtex  
A quantitative model of the phytochrome-PIF light signalling initiating chloroplast development. Dubreuil, C., Ji, Y., Strand, Å., & Grönlund, A. Scientific Reports, 7(1): 13884. December 2017.
A quantitative model of the phytochrome-PIF light signalling initiating chloroplast development [link]Paper   doi   link   bibtex  
Active-site plasticity revealed in the asymmetric dimer of AnPrx6 the 1-Cys peroxiredoxin and molecular chaperone from Anabaena sp. PCC 7120. Mishra, Y., Hall, M., Locmelis, R., Nam, K., Söderberg, C. A. G., Storm, P., Chaurasia, N., Rai, L. C., Jansson, S., Schröder, W. P., & Sauer, U. H. Scientific Reports, 7(1): 17151. December 2017.
Active-site plasticity revealed in the asymmetric dimer of AnPrx6 the 1-Cys peroxiredoxin and molecular chaperone from Anabaena sp. PCC 7120 [link]Paper   doi   link   bibtex  
A collection of genetically engineered Populus trees reveals wood biomass traits that predict glucose yield from enzymatic hydrolysis. Escamez, S., Latha Gandla, M., Derba-Maceluch, M., Lundqvist, S., Mellerowicz, E. J., Jönsson, L. J., & Tuominen, H. Scientific Reports, 7(1): 15798. December 2017.
A collection of genetically engineered Populus trees reveals wood biomass traits that predict glucose yield from enzymatic hydrolysis [link]Paper   doi   link   bibtex  
Type B Response Regulators Act As Central Integrators in Transcriptional Control of the Auxin Biosynthesis Enzyme TAA1. Yan, Z., Liu, X., Ljung, K., Li, S., Zhao, W., Yang, F., Wang, M., & Tao, Y. Plant Physiology, 175(3): 1438–1454. November 2017.
Type B Response Regulators Act As Central Integrators in Transcriptional Control of the Auxin Biosynthesis Enzyme TAA1 [link]Paper   doi   link   bibtex  
The carbon bonus of organic nitrogen enhances nitrogen use efficiency of plants: The carbon bonus of organic nitrogen. Franklin, O., Cambui, C. A., Gruffman, L., Palmroth, S., Oren, R., & Näsholm, T. Plant, Cell & Environment, 40(1): 25–35. January 2017.
The carbon bonus of organic nitrogen enhances nitrogen use efficiency of plants: The carbon bonus of organic nitrogen [link]Paper   doi   link   bibtex  
Informing climate models with rapid chamber measurements of forest carbon uptake. Metcalfe, D. B., Ricciuto, D., Palmroth, S., Campbell, C., Hurry, V., Mao, J., Keel, S. G., Linder, S., Shi, X., Näsholm, T., Ohlsson, K. E. A., Blackburn, M., Thornton, P. E., & Oren, R. Global Change Biology, 23(5): 2130–2139. May 2017.
Informing climate models with rapid chamber measurements of forest carbon uptake [link]Paper   doi   link   bibtex  
The Eucalyptus linker histone variant EgH1.3 cooperates with the transcription factor EgMYB1 to control lignin biosynthesis during wood formation. Soler, M., Plasencia, A., Larbat, R., Pouzet, C., Jauneau, A., Rivas, S., Pesquet, E., Lapierre, C., Truchet, I., & Grima‐Pettenati, J. New Phytologist, 213(1): 287–299. January 2017.
The <i>Eucalyptus</i> linker histone variant EgH1.3 cooperates with the transcription factor EgMYB1 to control lignin biosynthesis during wood formation [link]Paper   doi   link   bibtex  
Thermal limits of leaf metabolism across biomes. O'sullivan, O. S., Heskel, M. A., Reich, P. B., Tjoelker, M. G., Weerasinghe, L. K., Penillard, A., Zhu, L., Egerton, J. J. G., Bloomfield, K. J., Creek, D., Bahar, N. H. A., Griffin, K. L., Hurry, V., Meir, P., Turnbull, M. H., & Atkin, O. K. Global Change Biology, 23(1): 209–223. January 2017.
Thermal limits of leaf metabolism across biomes [link]Paper   doi   link   bibtex  
Genotypic variability in Populus tremula L. affects how anthropogenic nitrogen enrichment influences litter decomposition. Bandau, F., Albrectsen, B. R., Julkunen-Tiitto, R., & Gundale, M. J. Plant and Soil, 410(1-2): 467–481. January 2017.
Genotypic variability in Populus tremula L. affects how anthropogenic nitrogen enrichment influences litter decomposition [link]Paper   doi   link   bibtex  
Histological analysis reveals the formation of shoots rather than embryos in regenerating cultures of Eucalyptus globulus. Dobrowolska, I., Andrade, G. M., Clapham, D., & Egertsdotter, U. Plant Cell, Tissue and Organ Culture (PCTOC), 128(2): 319–326. February 2017.
Histological analysis reveals the formation of shoots rather than embryos in regenerating cultures of Eucalyptus globulus [link]Paper   doi   link   bibtex  
The High Light Response and Redox Control of Thylakoid FtsH Protease in Chlamydomonas reinhardtii. Wang, F., Qi, Y., Malnoë, A., Choquet, Y., Wollman, F., & de Vitry, C. Molecular Plant, 10(1): 99–114. January 2017.
The High Light Response and Redox Control of Thylakoid FtsH Protease in Chlamydomonas reinhardtii [link]Paper   doi   link   bibtex  
Cytosolic invertase contributes to the supply of substrate for cellulose biosynthesis in developing wood. Rende, U., Wang, W., Gandla, M. L., Jönsson, L. J., & Niittylä, T. New Phytologist, 214(2): 796–807. April 2017.
Cytosolic invertase contributes to the supply of substrate for cellulose biosynthesis in developing wood [link]Paper   doi   link   bibtex  
Shaping plant development through the SnRK1–TOR metabolic regulators. Baena-González, E., & Hanson, J. Current Opinion in Plant Biology, 35: 152–157. February 2017.
Shaping plant development through the SnRK1–TOR metabolic regulators [link]Paper   doi   link   bibtex  
Extensive translational regulation during seed germination revealed by polysomal profiling. Bai, B., Peviani, A., Horst, S., Gamm, M., Snel, B., Bentsink, L., & Hanson, J. New Phytologist, 214(1): 233–244. April 2017.
Extensive translational regulation during seed germination revealed by polysomal profiling [link]Paper   doi   link   bibtex  
Contribution of cellular autolysis to tissular functions during plant development. Escamez, S., & Tuominen, H. Current Opinion in Plant Biology, 35: 124–130. February 2017.
Contribution of cellular autolysis to tissular functions during plant development [link]Paper   doi   link   bibtex  
Amino acid transporter mutants of Arabidopsis provides evidence that a non-mycorrhizal plant acquires organic nitrogen from agricultural soil: Organic nitrogen uptake by Arabidopsis mutants. Ganeteg, U., Ahmad, I., Jämtgård, S., Aguetoni-Cambui, C., Inselsbacher, E., Svennerstam, H., Schmidt, S., & Näsholm, T. Plant, Cell & Environment, 40(3): 413–423. March 2017.
Amino acid transporter mutants of <i>Arabidopsis</i> provides evidence that a non-mycorrhizal plant acquires organic nitrogen from agricultural soil: Organic nitrogen uptake by Arabidopsis mutants [link]Paper   doi   link   bibtex  
Environmental and hormonal control of cambial stem cell dynamics. Bhalerao, R. P., & Fischer, U. Journal of Experimental Botany, 68(1): 79–87. January 2017.
Environmental and hormonal control of cambial stem cell dynamics [link]Paper   doi   link   bibtex  
Defense Responses in Aspen with Altered Pectin Methylesterase Activity Reveal the Hormonal Inducers of Tyloses. Leśniewska, J., Öhman, D., Krzesłowska, M., Kushwah, S., Barciszewska-Pacak, M., Kleczkowski, L. A., Sundberg, B., Moritz, T., & Mellerowicz, E. J. Plant Physiology, 173(2): 1409–1419. February 2017.
Defense Responses in Aspen with Altered Pectin Methylesterase Activity Reveal the Hormonal Inducers of Tyloses [link]Paper   doi   link   bibtex  
High-Resolution Cell-Type Specific Analysis of Cytokinins in Sorted Root Cell Populations of Arabidopsis thaliana. Novák, O., Antoniadi, I., & Ljung, K. In Kleine-Vehn, J., & Sauer, M., editor(s), Plant Hormones, volume 1497, pages 231–248. Springer New York, New York, NY, 2017. Series Title: Methods in Molecular Biology
High-Resolution Cell-Type Specific Analysis of Cytokinins in Sorted Root Cell Populations of Arabidopsis thaliana [link]Paper   doi   link   bibtex  
The redox control of photorespiration: from biochemical and physiological aspects to biotechnological considerations. Keech, O., Gardeström, P., Kleczkowski, L. A., & Rouhier, N. Plant, Cell & Environment, 40(4): 553–569. April 2017.
The redox control of photorespiration: from biochemical and physiological aspects to biotechnological considerations [link]Paper   doi   link   bibtex  
Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification. Robertson, F. M., Gundappa, M. K., Grammes, F., Hvidsten, T. R., Redmond, A. K., Lien, S., Martin, S. A. M., Holland, P. W. H., Sandve, S. R., & Macqueen, D. J. Genome Biology, 18(1): 111. December 2017.
Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification [link]Paper   doi   link   bibtex  
In Vitro Alkylation Methods for Assessing the Protein Redox State. Zannini, F., Couturier, J., Keech, O., & Rouhier, N. In Fernie, A. R., Bauwe, H., & Weber, A. P., editor(s), Photorespiration, volume 1653, pages 51–64. Springer New York, New York, NY, 2017. Series Title: Methods in Molecular Biology
In Vitro Alkylation Methods for Assessing the Protein Redox State [link]Paper   doi   link   bibtex  
Protein expression in tension wood formation monitored at high tissue resolution in Populus. Bygdell, J., Srivastava, V., Obudulu, O., Srivastava, M. K, Nilsson, R., Sundberg, B., Trygg, J., Mellerowicz, E. J, & Wingsle, G. Journal of Experimental Botany, 68(13): 3405–3417. June 2017.
Protein expression in tension wood formation monitored at high tissue resolution in Populus [link]Paper   doi   link   bibtex  
Ethylene Regulates Differential Growth via BIG ARF-GEF-Dependent Post-Golgi Secretory Trafficking in Arabidopsis. Jonsson, K., Boutté, Y., Singh, R. K., Gendre, D., & Bhalerao, R. P. The Plant Cell, 29(5): 1039–1052. May 2017.
Ethylene Regulates Differential Growth via BIG ARF-GEF-Dependent Post-Golgi Secretory Trafficking in Arabidopsis [link]Paper   doi   link   bibtex  
Small- and large-scale heterogeneity in genetic variation across the collard flycatcher genome: implications for estimating genetic diversity in nonmodel organisms. Ingvarsson, P. K., & Wang, J. Molecular Ecology Resources, 17(4): 583–585. July 2017.
Small- and large-scale heterogeneity in genetic variation across the collard flycatcher genome: implications for estimating genetic diversity in nonmodel organisms [link]Paper   doi   link   bibtex  
Spatially resolved transcriptome profiling in model plant species. Giacomello, S., Salmén, F., Terebieniec, B. K., Vickovic, S., Navarro, J. F., Alexeyenko, A., Reimegård, J., McKee, L. S., Mannapperuma, C., Bulone, V., Ståhl, P. L., Sundström, J. F., Street, N. R., & Lundeberg, J. Nature Plants, 3(6): 17061. June 2017.
Spatially resolved transcriptome profiling in model plant species [link]Paper   doi   link   bibtex  
Spatial analysis increases efficiency of progeny testing of Chinese fir. Bian, L., Zheng, R., Su, S., Lin, H., Xiao, H., Wu, H. X., & Shi, J. Journal of Forestry Research, 28(3): 445–452. May 2017.
Spatial analysis increases efficiency of progeny testing of Chinese fir [link]Paper   doi   link   bibtex  
A circRNA from SEPALLATA3 regulates splicing of its cognate mRNA through R-loop formation. Conn, V. M., Hugouvieux, V., Nayak, A., Conos, S. A., Capovilla, G., Cildir, G., Jourdain, A., Tergaonkar, V., Schmid, M., Zubieta, C., & Conn, S. J. Nature Plants, 3(5): 17053. May 2017.
A circRNA from SEPALLATA3 regulates splicing of its cognate mRNA through R-loop formation [link]Paper   doi   link   bibtex  
Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering. You, Y., Sawikowska, A., Neumann, M., Posé, D., Capovilla, G., Langenecker, T., Neher, R. A., Krajewski, P., & Schmid, M. Nature Communications, 8(1): 15120. August 2017.
Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering [link]Paper   doi   link   bibtex  
In muro deacetylation of xylan affects lignin properties and improves saccharification of aspen wood. Pawar, P. M., Derba-Maceluch, M., Chong, S., Gandla, M. L., Bashar, S. S., Sparrman, T., Ahvenainen, P., Hedenström, M., Özparpucu, M., Rüggeberg, M., Serimaa, R., Lawoko, M., Tenkanen, M., Jönsson, L. J., & Mellerowicz, E. J. Biotechnology for Biofuels, 10(1): 98. December 2017.
In muro deacetylation of xylan affects lignin properties and improves saccharification of aspen wood [link]Paper   doi   link   bibtex  
Sll1783, a monooxygenase associated with polysaccharide processing in the unicellular cyanobacterium Synechocystis PCC 6803. Miranda, H., Immerzeel, P., Gerber, L., Hörnaeus, K., Lind, S. B., Pattanaik, B., Lindberg, P., Mamedov, F., & Lindblad, P. Physiologia Plantarum, 161(2): 182–195. October 2017.
Sll1783, a monooxygenase associated with polysaccharide processing in the unicellular cyanobacterium <i>Synechocystis</i> PCC 6803 [link]Paper   doi   link   bibtex  
MEDIATOR18 and MEDIATOR20 confer susceptibility to Fusarium oxysporum in Arabidopsis thaliana. Fallath, T., Kidd, B. N., Stiller, J., Davoine, C., Björklund, S., Manners, J. M., Kazan, K., & Schenk, P. M. PLOS ONE, 12(4): e0176022. April 2017.
MEDIATOR18 and MEDIATOR20 confer susceptibility to Fusarium oxysporum in Arabidopsis thaliana [link]Paper   doi   link   bibtex  
Spatial variability of organic matter molecular composition and elemental geochemistry in surface sediments of a small boreal Swedish lake. Tolu, J., Rydberg, J., Meyer-Jacob, C., Gerber, L., & Bindler, R. Biogeosciences, 14(7): 1773–1792. April 2017.
Spatial variability of organic matter molecular composition and elemental geochemistry in surface sediments of a small boreal Swedish lake [link]Paper   doi   link   bibtex   abstract  
Patterns of additive genotype-by-environment interaction in tree height of Norway spruce in southern and central Sweden. Chen, Z., Karlsson, B., & Wu, H. X. Tree Genetics & Genomes, 13(1): 25. February 2017.
Patterns of additive genotype-by-environment interaction in tree height of Norway spruce in southern and central Sweden [link]Paper   doi   link   bibtex  
cis-Cinnamic Acid Is a Novel, Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation. Steenackers, W., Klíma, P., Quareshy, M., Cesarino, I., Kumpf, R. P., Corneillie, S., Araújo, P., Viaene, T., Goeminne, G., Nowack, M. K., Ljung, K., Friml, J., Blakeslee, J. J., Novák, O., Zažímalová, E., Napier, R., Boerjan, W., & Vanholme, B. Plant Physiology, 173(1): 552–565. January 2017.
cis-Cinnamic Acid Is a Novel, Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation [link]Paper   doi   link   bibtex  
Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration. Sun, X., Cahill, J., Van Hautegem, T., Feys, K., Whipple, C., Novák, O., Delbare, S., Versteele, C., Demuynck, K., De Block, J., Storme, V., Claeys, H., Van Lijsebettens, M., Coussens, G., Ljung, K., De Vliegher, A., Muszynski, M., Inzé, D., & Nelissen, H. Nature Communications, 8(1): 14752. April 2017.
Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration [link]Paper   doi   link   bibtex  
Regulating plant physiology with organic electronics. Poxson, D. J., Karady, M., Gabrielsson, R., Alkattan, A. Y., Gustavsson, A., Doyle, S. M., Robert, S., Ljung, K., Grebe, M., Simon, D. T., & Berggren, M. Proceedings of the National Academy of Sciences, 114(18): 4597–4602. May 2017.
Regulating plant physiology with organic electronics [link]Paper   doi   link   bibtex   abstract  
Gene co-expression network connectivity is an important determinant of selective constraint. Mähler, N., Wang, J., Terebieniec, B. K., Ingvarsson, P. K., Street, N. R., & Hvidsten, T. R. PLOS Genetics, 13(4): e1006402. April 2017.
Gene co-expression network connectivity is an important determinant of selective constraint [link]Paper   doi   link   bibtex  
At bHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana. Le Hir, R., Castelain, M., Chakraborti, D., Moritz, T., Dinant, S., & Bellini, C. Physiologia Plantarum, 160(3): 312–327. July 2017.
At <i>bHLH68</i> transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in <i>Arabidopsis thaliana</i> [link]Paper   doi   link   bibtex  
The Arabidopsis Cop9 signalosome subunit 4 (CSN4) is involved in adventitious root formation. Pacurar, D. I., Pacurar, M. L., Lakehal, A., Pacurar, A. M., Ranjan, A., & Bellini, C. Scientific Reports, 7(1): 628. December 2017.
The Arabidopsis Cop9 signalosome subunit 4 (CSN4) is involved in adventitious root formation [link]Paper   doi   link   bibtex  
Interspecific Plastome Recombination Reflects Ancient Reticulate Evolution in Picea (Pinaceae). Sullivan, A. R., Schiffthaler, B., Thompson, S. L., Street, N. R., & Wang, X. Molecular Biology and Evolution, 34(7): 1689–1701. July 2017.
Interspecific Plastome Recombination Reflects Ancient Reticulate Evolution in Picea (Pinaceae) [link]Paper   doi   link   bibtex  
SHADE AVOIDANCE 4 Is Required for Proper Auxin Distribution in the Hypocotyl. Ge, Y., Yan, F., Zourelidou, M., Wang, M., Ljung, K., Fastner, A., Hammes, U. Z., Di Donato, M., Geisler, M., Schwechheimer, C., & Tao, Y. Plant Physiology, 173(1): 788–800. January 2017.
SHADE AVOIDANCE 4 Is Required for Proper Auxin Distribution in the Hypocotyl [link]Paper   doi   link   bibtex  
Downregulation of RWA genes in hybrid aspen affects xylan acetylation and wood saccharification. Pawar, P. M., Ratke, C., Balasubramanian, V. K., Chong, S., Gandla, M. L., Adriasola, M., Sparrman, T., Hedenström, M., Szwaj, K., Derba-Maceluch, M., Gaertner, C., Mouille, G., Ezcurra, I., Tenkanen, M., Jönsson, L. J., & Mellerowicz, E. J. New Phytologist, 214(4): 1491–1505. 2017. _eprint: https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.14489
Downregulation of RWA genes in hybrid aspen affects xylan acetylation and wood saccharification [link]Paper   doi   link   bibtex   abstract  
Downregulation of \textlessspan style="font-variant:small-caps;"\textgreaterRWA\textless/span\textgreater genes in hybrid aspen affects xylan acetylation and wood saccharification. Pawar, P. M., Ratke, C., Balasubramanian, V. K., Chong, S., Gandla, M. L., Adriasola, M., Sparrman, T., Hedenström, M., Szwaj, K., Derba‐Maceluch, M., Gaertner, C., Mouille, G., Ezcurra, I., Tenkanen, M., Jönsson, L. J., & Mellerowicz, E. J. New Phytologist, 214(4): 1491–1505. June 2017.
Downregulation of \textlessspan style="font-variant:small-caps;"\textgreaterRWA\textless/span\textgreater genes in hybrid aspen affects xylan acetylation and wood saccharification [link]Paper   doi   link   bibtex  
Zooming In on Plant Hormone Analysis: Tissue- and Cell-Specific Approaches. Novák, O., Napier, R., & Ljung, K. Annual Review of Plant Biology, 68(1): 323–348. April 2017.
Zooming In on Plant Hormone Analysis: Tissue- and Cell-Specific Approaches [link]Paper   doi   link   bibtex  
Landscape relatedness: detecting contemporary fine-scale spatial structure in wild populations. Norman, A. J., Stronen, A. V., Fuglstad, G., Ruiz-Gonzalez, A., Kindberg, J., Street, N. R., & Spong, G. Landscape Ecology, 32(1): 181–194. January 2017.
Landscape relatedness: detecting contemporary fine-scale spatial structure in wild populations [link]Paper   doi   link   bibtex  
Auxin 2016: a burst of auxin in the warm south of China. Vernoux, T., & Robert, S. Development, 144(4): 533–540. February 2017.
Auxin 2016: a burst of auxin in the warm south of China [link]Paper   doi   link   bibtex   abstract  
The ERECTA and ERECTA ‐like genes control a developmental shift during xylem formation in Arabidopsis. Fischer, U., & Teichmann, T. New Phytologist, 213(4): 1562–1563. March 2017.
The <i>ERECTA</i> and <i>ERECTA</i> ‐like genes control a developmental shift during xylem formation in <i>Arabidopsis</i> [link]Paper   doi   link   bibtex  
Identification and characterization of inhibitors of UDP-glucose and UDP-sugar pyrophosphorylases for in vivo studies. Decker, D., Öberg, C., & Kleczkowski, L. A. The Plant Journal, 90(6): 1093–1107. June 2017.
Identification and characterization of inhibitors of UDP-glucose and UDP-sugar pyrophosphorylases for <i>in vivo</i> studies [link]Paper   doi   link   bibtex  
NorWood: a gene expression resource for evo‐devo studies of conifer wood development. Jokipii‐Lukkari, S., Sundell, D., Nilsson, O., Hvidsten, T. R., Street, N. R., & Tuominen, H. New Phytologist, 216(2): 482–494. October 2017.
NorWood: a gene expression resource for evo‐devo studies of conifer wood development [link]Paper   doi   link   bibtex  
The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth. Weiste, C., Pedrotti, L., Selvanayagam, J., Muralidhara, P., Fröschel, C., Novák, O., Ljung, K., Hanson, J., & Dröge-Laser, W. PLOS Genetics, 13(2): e1006607. February 2017.
The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth [link]Paper   doi   link   bibtex  
Editorial overview: Growth and development: Change is in the air: how plants modulate development in response to the environment. Ahn, J. H., & Schmid, M. Current Opinion in Plant Biology, 35: iv–vi. February 2017.
Editorial overview: Growth and development: Change is in the air: how plants modulate development in response to the environment [link]Paper   doi   link   bibtex  
Dual herbivore attack and herbivore density affect metabolic profiles of Brassica nigra leaves: Plant metabolome during dual insect attack. Ponzio, C., Papazian, S., Albrectsen, B. R., Dicke, M., & Gols, R. Plant, Cell & Environment, 40(8): 1356–1367. August 2017.
Dual herbivore attack and herbivore density affect metabolic profiles of <i>Brassica nigra</i> leaves: Plant metabolome during dual insect attack [link]Paper   doi   link   bibtex  
Metabolic reprogramming in response to cold stress is like real estate, it's all about location. Hurry, V. Plant, Cell & Environment, 40(5): 599–601. 2017. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.12923
Metabolic reprogramming in response to cold stress is like real estate, it's all about location [link]Paper   doi   link   bibtex   abstract  
Differential response of Scots pine seedlings to variable intensity and ratio of red and far-red light: Scots pine response to light intensity and shade. Razzak, A., Ranade, S. S., Strand, Å., & García-Gil, M. R. Plant, Cell & Environment, 40(8): 1332–1340. August 2017.
Differential response of Scots pine seedlings to variable intensity and ratio of red and far-red light: Scots pine response to light intensity and shade [link]Paper   doi   link   bibtex  
Contrasting patterns of cytokinins between years in senescing aspen leaves. Edlund, E., Novak, O., Karady, M., Ljung, K., & Jansson, S. Plant, Cell & Environment, 40(5): 622–634. May 2017.
Contrasting patterns of cytokinins between years in senescing aspen leaves [link]Paper   doi   link   bibtex  
Quick Histochemical Staining Methods to Detect Cell Death in Xylem Elements of Plant Tissues. Escamez, S., Bollhöner, B., & Tuominen, H. In de Lucas, M., & Etchhells, J. P., editor(s), Xylem, volume 1544, pages 27–36. Springer New York, New York, NY, 2017. Series Title: Methods in Molecular Biology
Quick Histochemical Staining Methods to Detect Cell Death in Xylem Elements of Plant Tissues [link]Paper   doi   link   bibtex  
Analysis of Lignin Composition and Distribution Using Fluorescence Laser Confocal Microspectroscopy. Decou, R., Serk, H., Ménard, D., & Pesquet, E. In de Lucas, M., & Etchhells, J. P., editor(s), Xylem, volume 1544, pages 233–247. Springer New York, New York, NY, 2017. Series Title: Methods in Molecular Biology
Analysis of Lignin Composition and Distribution Using Fluorescence Laser Confocal Microspectroscopy [link]Paper   doi   link   bibtex  
The HhoA protease from Synechocystis sp. PCC 6803 – Novel insights into structure and activity regulation. Hall, M., Wagner, R., Lam, X. T., Funk, C., & Persson, K. Journal of Structural Biology, 198(3): 147–153. June 2017.
The HhoA protease from Synechocystis sp. PCC 6803 – Novel insights into structure and activity regulation [link]Paper   doi   link   bibtex  
Establishment and Utilization of Habituated Cell Suspension Cultures for Hormone-Inducible Xylogenesis. Ménard, D., Serk, H., Decou, R., & Pesquet, E. In de Lucas, M., & Etchhells, J. P., editor(s), Xylem, volume 1544, pages 37–57. Springer New York, New York, NY, 2017. Series Title: Methods in Molecular Biology
Establishment and Utilization of Habituated Cell Suspension Cultures for Hormone-Inducible Xylogenesis [link]Paper   doi   link   bibtex  
Laser Capture Microdissection Protocol for Xylem Tissues of Woody Plants. Blokhina, O., Valerio, C., Sokołowska, K., Zhao, L., Kärkönen, A., Niittylä, T., & Fagerstedt, K. Frontiers in Plant Science, 07. January 2017.
Laser Capture Microdissection Protocol for Xylem Tissues of Woody Plants [link]Paper   doi   link   bibtex  
Transcriptional and Post-transcriptional Mechanisms Limit Heading Date 1 (Hd1) Function to Adapt Rice to High Latitudes. Goretti, D., Martignago, D., Landini, M., Brambilla, V., Gómez-Ariza, J., Gnesutta, N., Galbiati, F., Collani, S., Takagi, H., Terauchi, R., Mantovani, R., & Fornara, F. PLOS Genetics, 13(1): e1006530. January 2017.
Transcriptional and Post-transcriptional Mechanisms Limit Heading Date 1 (Hd1) Function to Adapt Rice to High Latitudes [link]Paper   doi   link   bibtex  
The potential role of forest management in Swedish scenarios towards climate neutrality by mid century. Cintas, O., Berndes, G., Hansson, J., Poudel, B. C., Bergh, J., Börjesson, P., Egnell, G., Lundmark, T., & Nordin, A. Forest Ecology and Management, 383: 73–84. January 2017.
The potential role of forest management in Swedish scenarios towards climate neutrality by mid century [link]Paper   doi   link   bibtex  
BatchMap: A parallel implementation of the OneMap R package for fast computation of F1 linkage maps in outcrossing species. Schiffthaler, B., Bernhardsson, C., Ingvarsson, P. K., & Street, N. R. PLOS ONE, 12(12): e0189256. December 2017.
BatchMap: A parallel implementation of the OneMap R package for fast computation of F1 linkage maps in outcrossing species [link]Paper   doi   link   bibtex