Use of the Foot-and-Mouth Disease Virus 2A Peptide Co-Expression System to Study Intracellular Protein Trafficking in Arabidopsis
PLoS One 2012;7(12):e51973

Xue W, Ruprecht C, Street N, Hematy K, Chang C, Frommer WB, Persson S, Niittylä T
Paramutation-Like Interaction of T-DNA Loci in Arabidopsis
PLoS ONE 2012 7(12): e51651

Rigas S, Ditengou FA, Ljung K, Daras G, Tietz O, Palme K, Hatzopoulos P
Root gravitropism and root hair development constitute coupled developmental responses regulated by auxin homeostasis in the Arabidopsis root apex
New Phytol. 2013; 197(4):1130-1141

Perspectives on plant photorespiratory metabolism.
Plant Biology 2013; 15(4):748-753

Caseys C, Glauser G, Stölting KN, Christe C, Albrectsen BR, Lexer C
Effects of interspecific recombination on functional traits in trees revealed by metabolomics and genotyping-by-resequencing
Plant Ecology & Diversity 2012 Nov 13. [Epub ahead of print]

Sairanen I, Novák O, Pencík A, Ikeda Y, Jones B, Sandberg G, Ljung K
Soluble Carbohydrates Regulate Auxin Biosynthesis via PIF Proteins in Arabidopsis
Plant Cell. 2012 Dec 3. [Epub ahead of print]

Baster P, Robert S, Kleine-Vehn J, Vanneste S, Kania U, Grunewald W, De Rybel B, Beeckman T, Friml J
SCF(TIR1/AFB)-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism
EMBO J. 2012 Dec 4

Chow WS, Fan DY, Oguchi R, Jia H, Losciale P, Park YI, He J, Oquist G, Shen YG, Anderson JM
Quantifying and monitoring functional photosystem II and the stoichiometry of the two photosystems in leaf segments: approaches and approximations.
Photosynth Res. 2012 113(1-3):63-74

Blanco-Rivero A, Shutova T, Román MJ, Villarejo A, Martinez F
Phosphorylation controls the localization and activation of the lumenal carbonic anhydrase in Chlamydomonas reinhardtii.
PLoS One. 2012;7(11):e49063

Engineering photorespiration: current state and future possibilities
Plant Biology 2013; 15(4):754-758

Spatiotemporal Regulation of Lateral Root Organogenesis in Arabidopsis by Cytokinin
The Plant Cell (2012) 24 (10): 3967-3981,

Chen D, Zhang X, Kang H, Sun X, Yin S, Du H, Yamanaka N, Gapare W, Wu HX, Liu C
Phylogeography of Quercus variabilis based on chloroplast DNA sequence in east asia: Multiple glacial refugia and mainland-migrated island populations
PLoS ONE 2012, 7(10): e47268.

Albrectsen BR, Hansson C
The diversity and identification of eulophid parasitic
wasps (Hymenoptera: Chalcidoidea: Eulophidae) on
Phyllocnistis labyrinthella (Lepidoptera: Gracillariidae)
from Västerbotten, Sweden
Entomologisk Tidskrift 2012, 133(3): 111-118

Albrectsen BR, Witzell J
Disentangling functions of fungal endophytes in forest trees
In: Fungi: Types, Environmental Impact and Role in Disease, Chapter 12, pp. 235-246
Edited by: Adolfo Paz Silva, María Sol; Nova Science Publishers, Inc 2012

Nakamura M, Kiefer CS, Grebe M
Planar polarity, tissue polarity and planar morphogenesis in plants
Curr Opin Plant Biol. 2012 Aug 17. [Epub ahead of print]

Tsai AY, Canam T, Gorzsás A, Mellerowicz EJ, Campbell MM, Master ER
Constitutive expression of a fungal glucuronoyl esterase in Arabidopsis reveals altered cell wall composition and structure
Plant Biotechnol J. 2012 Aug 27 [Epub ahead of print]

Svedström K , Lucenius J, Van den Bulcke J, Van Loo D, 4, Immerzeel P, Suuronen J-P, Brabant L, Van Acker J, Saranpää P, Fagerstedt K, Mellerowicz E, Serimaa R
Hierarchical structure of juvenile hybrid aspen xylem revealed using X-ray scattering and microtomography
Trees July 2012 online

Gorshkova T, Brutch N, Chabbert B, Deyholos M, Hayashi T, Lev-Yadun S, Mellerowicz EJ, Morvan C, Neutelings G, Pilate G
Plant Fiber Formation: State of the Art, Recent and Expected Progress, and Open Questions
Crit Rev Plant Sci 2012, 31(3):201-228

Li L, Ljung K, Breton G, Schmitz RJ, Pruneda-Paz J, Cowing-Zitron C, Cole BJ, Ivans LJ, Pedmale UV, Jung HS, Ecker JR, Kay SA, Chory J
Linking photoreceptor excitation to changes in plant architecture
Genes Dev. 2012, 26(8):785-90

Tiwari A, Vivian-Smith A, Ljung K, Offringa R, Heuvelink E
Physiological and morphological changes during early and later stages of fruit growth in Capsicum annuum
Physiol Plant. 2013; 147(3):396-406

Lilley JL, Gee CW, Sairanen I, Ljung K, Nemhauser JL
An endogenous carbon-sensing pathway triggers increased auxin flux and hypocotyl elongation
Plant Physiol. 2012 Oct 16. [Epub ahead of print]

The genetic dissection of a short term response to low CO2 supports the possibility for peroxide-mediated decarboxylation of photorespiratory intermediates in the peroxisome
Mol. Plant (2012), online: September 30, 2012.

Rigal A, Yordanov YS, Perrone I, Karlberg A, Tisserant E, Bellini C, Busov VB, Martin F, Kohler A, Bhalerao R, Legué V
The AINTEGUMENTA LIKE1 Homeotic Transcription Factor PtAIL1 Controls the Formation of Adventitious Root Primordia in Poplar
Plant Physiol. 2012;160(4):1996-2006

Ivanov AG, Rosso D, Savitch LV, Stachula P, Rosembert M, Oquist G, Hurry V, Hüner NP
Implications of alternative electron sinks in increased resistance of PSII and PSI photochemistry to high light stress in cold-acclimated Arabidopsis thaliana.
Photosynth Res. 2012 Sep;113(1-3):191-206

Fuentes S, Ljung K, Sorefan K, Alvey E, Harberd NP, Ostergaard L
Fruit Growth in Arabidopsis Occurs via DELLA-Dependent and DELLA-Independent Gibberellin Responses
Plant Cell. 2012 Oct;24(10):3982-96

Miranda H, Cheregi O, Netotea S, Hvidsten TR, Moritz T, Funk C
Co-expression analysis, proteomic and metabolomic study on the impact of a Deg/HtrA protease triple mutant in Synechocystis sp. PCC 6803 exposed to temperature and high light stress
J. of Proteomics 2013, 78:94-311

Cheregi O, Vermaas W, Funk C
The search for new chlorophyll-binding proteins in the cyanobacterium Synechocystis sp. PCC 6803
J Biotechnol. 2012 Jul 1. [Epub ahead of print]

Isabel N, M Lamothe, SL Thompson
A second-generation diagnostic single nucleotide polymorphism (SNP)-based assay, optimized to distinguish among eight poplar (Populus L.) species and their early hybrids
Tree Genetics & Genomes 2012 October

Klintenäs M, Pin PA, Benlloch R, Ingvarsson PK, Nilsson O
Analysis of conifer FLOWERING LOCUS T/TERMINAL FLOWER1-like genes provides evidence for dramatic biochemical evolution in the angiosperm FT lineage
New Phytol. 2012, 196(4):1260-1273

Roberts IN, Lam XT, Miranda H, Kieselbach T, Funk C
Degradation of PsbO by the Deg Protease HhoA Is Thioredoxin Dependent
PLoS One. 2012;7(9):e45713 Epub Sep 19

Detection of the water-binding sites of the oxygen-evolving complex of Photosystem II using W-band 17O electron-electron double resonance-detected NMR spectroscopy
J Am Chem Soc 2012, 134(40): 16619-34

Ohman D, Demedts B, Kumar M, Gerber L, Gorzsás A, Goeminne G, Hedenström M, Ellis B, Boerjan W, Sundberg B
MYB103 is required for FERULATE-5-HYDROXYLASE expression and syringyl lignin biosynthesis in Arabidopsis stems
Plant J. 2012 Sep 12. [Epub ahead of print]

Takata N, Eriksson ME
A simple and efficient transient transformation for hybrid aspen (Populus tremula × P. tremuloides)
Plant Methods 2012, 8:30

Cruz-Ramírez A, Díaz-Triviño S, Blilou I, Grieneisen VA, Sozzani R, Zamioudis C, Miskolczi P, Nieuwland J, Benjamins R, Dhonukshe P, Caballero-Pérez J, Horvath B, Long Y, Mähönen AP, Zhang H, Xu J, Murray JA, Benfey PN, Bako L, Marée AF, Scheres B
A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division
Cell 2012; 150(5):1002-1015

Sahlin K, Street N, Lundeberg J, Arvestad L
Improved gap size estimation for scaffolding algorithms
Bioinformatics. 2012 Sep 1;28(17):2215-22

Zang H, Moritz T, Norstedt G, Hirschberg AL, Tollet-Egnell P
Effects of oestrogen and testosterone therapy on serum metabolites in postmenopausal women
Clin Endocrinol (Oxf). 2012 77(2):288-95

Surowiec I, Nowik W, Moritz T
Mass spectrometric identification of new minor indigoids in shellfish purple dye from Hexaplex trunculus
DYES AND PIGMENTS 2012 94(2):363-369

Li X, Wu HX, Southerton SG
Identification of putative candidate genes for juvenile wood density in Pinus radiata
Tree Physiol. 2012; 32(8):1046-57

Suorsa M, Järvi S, Grieco M, Nurmi M, Pietrzykowska M, Rantala M, Kangasjärvi S, Paakkarinen V, Tikkanen M, Jansson S, Aro EM
PROTON GRADIENT REGULATION5 Is Essential for Proper Acclimation of Arabidopsis Photosystem I to Naturally and Artificially Fluctuating Light Conditions.
Plant Cell. 2012 24(7):2934-2948

Madsen R, Rantapää-Dahlqvist S, Lundstedt T, Moritz T, Trygg J
Metabolic responses to change in disease activity during tumor necrosis factor inhibition in patients with rheumatoid arthritis
J Proteome Res. 2012 11(7):3796-804

Novák O, Hényková E, Sairanen I, Kowalczyk M, Pospíšil T, Ljung K
Tissue specific profiling of the Arabidopsis thaliana auxin metabolome
Plant J. 2012 72(3):523-536

Genetic approach towards the identification of auxin-cytokinin crosstalk components involved in root development
Philos Trans R Soc Lond B Biol Sci. (2012) 367(1595):1469–1478,

Gutierrez L, Mongelard G, Flokovác K, Păcurard DI, Nováka O, Staswick P, Kowalczyk M, Păcurar M, Demailly H, Geiss G, Bellini C
Auxin Controls Arabidopsis Adventitious Root Initiation by Regulating Jasmonic Acid Homeostasis
The Plant Cell June 2012 24(6): 2515-2527

Shaikhali J, Barajas-Lopéz J, Ötvös K, Kremnev D, Sánchez Garcia A, Srivastava V, Wingsle G, Bako L, Strand Å
The CRYPTOCHROME1-dependent response to excess light is mediated through the transcriptional activators ZINC FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM LIKE1 and 2 in Arabidopsis
Plant Cell, 2012, 24(7):3009-25

Barajas-López J, Blanco NE, Strand A
Plastid-to-nucleus communication, signals controlling the running of the plant cell
BBA-Molecular Cell Research 2013, 1833(2):425-37

Shaikhali J, Noren L, Barajas-Lopez JD, Srivastava V, Konig J, Sauer UH, Wingsle G, Dietz KJ, Strand A
Redox-mediated mechanisms regulate DNA-binding activity of the G-group of bZIP transcription factors in Arabidopsis.
J Biol Chem. 2012, 287(33):27510-25

Pin PA, Nilsson O
The multifaceted roles of FT in plant development
Plant Cell Environ. 2012 Jun 14 [Epub ahead of print]

Chen X, Naramoto S, Robert S, Tejos R, Löfke C, Lin D, Yang Z, Friml J
ABP1 and ROP6 GTPase Signaling Regulate Clathrin-Mediated Endocytosis in Arabidopsis Roots
Curr Biol. 2012, 22(14):1326-32

Cooke JE, Eriksson ME, Junttila O
The Dynamic Nature of Bud Dormancy in Trees: Environmental Control and Molecular Mechanisms
Plant Cell Environ. 2012 10(35):1707-1728

Tuskan GA, DiFazio S, Faivre-Rampant P, Gaudet M, Harfouche A, Jorge V, Labbé JL, Ranjan P, Sabatti M, Slavov G, Street N, Tschaplinski TJ, Yin T
The obscure events contributing to the evolution of an incipient sex chromosome in Populus: a retrospective working hypothesis
Tree Genetics & Genomes 2012; 8(3):559-571