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  2004 (102)
Regulation of organic and inorganic nitrogen uptake in Scots pine ( Pinus sylvestris ) seedlings. Öhlund, J., & Näsholm, T. Tree Physiology, 24(12): 1397–1402. December 2004.
Regulation of organic and inorganic nitrogen uptake in Scots pine ( Pinus sylvestris ) seedlings [link]Paper   doi   link   bibtex   abstract  
Chemometric and bioinformatic methodologies in modeling and interpretation of metabolic and genomic data. Antti, H. Abstracts of Papers of the American Chemical Society, 228: U112–U113. August 2004. Patent Number: 1 Place: Washington Publisher: Amer Chemical Soc WOS:000223712800499
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A PINOID-Dependent Binary Switch in Apical-Basal PIN Polar Targeting Directs Auxin Efflux. Friml, J., Yang, X., Michniewicz, M., Weijers, D., Quint, A., Tietz, O., Benjamins, R., Ouwerkerk, P. B. F., Ljung, K., Sandberg, G., Hooykaas, P. J. J., Palme, K., & Offringa, R. Science, 306(5697): 862–865. October 2004.
A PINOID-Dependent Binary Switch in Apical-Basal PIN Polar Targeting Directs Auxin Efflux [link]Paper   doi   link   bibtex  
Morphological and physiological traits influencing biomass productivity in short-rotation coppice poplar. Rae, A M, Robinson, K M, Street, N R, & Taylor, G Canadian Journal of Forest Research, 34(7): 1488–1498. July 2004. Publisher: NRC Research Press
Morphological and physiological traits influencing biomass productivity in short-rotation coppice poplar [link]Paper   doi   link   bibtex  
Defining leaf traits linked to yield in short-rotation coppice Salix. Robinson, K. M, Karp, A, & Taylor, G. Biomass and Bioenergy, 26(5): 417–431. May 2004.
Defining leaf traits linked to yield in short-rotation coppice Salix [link]Paper   doi   link   bibtex   abstract  
Inbreeding in Pinus radiata - V. The effects of inbreeding on fecundity. Wu, H. X., Owen, J. V., Abarquez, A., & Matheson, A. C. Silvae Genetica, 53(2): 80–87. 2004. Number: 2
Inbreeding in Pinus radiata - V. The effects of inbreeding on fecundity [link]Paper   doi   link   bibtex   abstract  
A transcriptional timetable of autumn senescence. Andersson, A., Keskitalo, J., Sjodin, A., Bhalerao, R. P., Sterky, F., Wissel, K., Tandre, K., Aspeborg, H., Moyle, R., Ohmiya, Y., Bhalerao, R., Brunner, A., Gustafsson, P., Karlsson, J., Lundeberg, J., Nilsson, O., Sandberg, G., Strauss, S., Sundberg, B., Uhlen, M., Jansson, S., & Nilsson, P. Genome Biology, 5(4): R24. 2004. Place: London Publisher: Bmc WOS:000220584700010
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MYB transcription factors are differentially expressed and regulated during secondary vascular tissue development in hybrid aspen. Karpinska, B., Karlsson, M., Srivastava, M., Stenberg, A., Schrader, J., Sterky, F., Bhalerao, R. P., & Wingsle, G. Plant Molecular Biology, 56(2): 255–270. September 2004.
MYB transcription factors are differentially expressed and regulated during secondary vascular tissue development in hybrid aspen [link]Paper   doi   link   bibtex   abstract  
Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements. Lescot, M., Rombauts, S., Zhang, J., Aubourg, S., Mathé, C., Jansson, S., Rouzé, P., & Boerjan, W. Theoretical and Applied Genetics, 109(1): 10–22. June 2004.
Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements [link]Paper   doi   link   bibtex   abstract  
Fertility and effective population size in seedling seed orchards of Casuarina equisetifolia and C-junghuhniana. Varghese, M., Lindgren, D., & Nicodemus, A. Silvae Genetica, 53(4): 164–168. 2004. Place: Warsaw Publisher: Sciendo WOS:000228214100005
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Progeny testing preceded by phenotypic pre-selection - Timing considerations. Danusevicius, D., & Lindgren, D. Silvae Genetica, 53(1): 20–26. 2004. Place: Warsaw Publisher: De Gruyter Poland Sp Zoo WOS:000223916000004
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Analytical methods in cytokinin research. Tarkowski, P., Dolezal, K., & Strnad, M. Chemicke Listy, 98(9): 834–841. 2004. Place: Prague 6 Publisher: Chemicke Listy WOS:000224366000004
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Design of experiments: an efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry. Gullberg, J., Jonsson, P., Nordström, A., Sjöström, M., & Moritz, T. Analytical Biochemistry, 331(2): 283–295. August 2004.
Design of experiments: an efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry [link]Paper   doi   link   bibtex   abstract  
Using chemometrics for navigating in the large data sets of genomics, proteomics, and metabonomics (gpm). Eriksson, L., Antti, H., Gottfries, J., Holmes, E., Johansson, E., Lindgren, F., Long, I., Lundstedt, T., Trygg, J., & Wold, S. Analytical and Bioanalytical Chemistry, 380(3): 419–429. October 2004.
Using chemometrics for navigating in the large data sets of genomics, proteomics, and metabonomics (gpm) [link]Paper   doi   link   bibtex   abstract  
Derivatization for LC-Electrospray Ionization-MS:  A Tool for Improving Reversed-Phase Separation and ESI Responses of Bases, Ribosides, and Intact Nucleotides. Nordström, A., Tarkowski, P., Tarkowska, D., Dolezal, K., Åstot, C., Sandberg, G., & Moritz, T. Analytical Chemistry, 76(10): 2869–2877. May 2004. Publisher: American Chemical Society
Derivatization for LC-Electrospray Ionization-MS:  A Tool for Improving Reversed-Phase Separation and ESI Responses of Bases, Ribosides, and Intact Nucleotides [link]Paper   doi   link   bibtex   abstract  
A Strategy for Identifying Differences in Large Series of Metabolomic Samples Analyzed by GC/MS. Jonsson, P., Gullberg, J., Nordström, A., Kusano, M., Kowalczyk, M., Sjöström, M., & Moritz, T. Analytical Chemistry, 76(6): 1738–1745. March 2004. Publisher: American Chemical Society
A Strategy for Identifying Differences in Large Series of Metabolomic Samples Analyzed by GC/MS [link]Paper   doi   link   bibtex   abstract  
Lipid function in plant cell polarity. Fischer, U., Men, S., & Grebe, M. Current Opinion in Plant Biology, 7(6): 670–676. December 2004.
Lipid function in plant cell polarity [link]Paper   doi   link   bibtex   abstract  
Geometric Trajectory Analysis of Metabolic Responses To Toxicity Can Define Treatment Specific Profiles. Keun, H. C., Ebbels, T. M. D., Bollard, M. E., Beckonert, O., Antti, H., Holmes, E., Lindon, J. C., & Nicholson, J. K. Chemical Research in Toxicology, 17(5): 579–587. May 2004. Publisher: American Chemical Society
Geometric Trajectory Analysis of Metabolic Responses To Toxicity Can Define Treatment Specific Profiles [link]Paper   doi   link   bibtex   abstract  
Identification and expression analysis of genes encoding putative cellulose synthases (CesA) in the hybrid aspen, Populus tremula (L.) x P-tremuloides (Michx.). Djerbi, S., Aspeborg, H., Nilsson, P., Sundberg, B., Mellerowicz, E., Blomqvist, K., & Teeri, T. T. Cellulose, 11(3-4): 301–312. December 2004. Place: Dordrecht Publisher: Springer WOS:000225573000004
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Statistical experimental design and partial least squares regression analysis of biofluid metabonomic NMR and clinical chemistry data for screening of adverse drug effects. Antti, H., Ebbels, T. M. D., Keun, H. C., Bollard, M. E., Beckonert, O., Lindon, J. C., Nicholson, J. K., & Holmes, E. Chemometrics and Intelligent Laboratory Systems, 73(1): 139–149. September 2004. Place: Amsterdam Publisher: Elsevier WOS:000223990900016
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Genetic variation in cessation of growth and frost hardiness and consequences for adaptation of Pinus sylvestris to climatic changes. Savolainen, O., Bokma, F., Garcia-Gil, R., Komulainen, P., & Repo, T. Forest Ecology and Management, 197(1-3): 79–89. August 2004. Place: Amsterdam Publisher: Elsevier Science Bv WOS:000223382700007
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Genetic Dissection of Nutritional Copper Signaling in Chlamydomonas Distinguishes Regulatory and Target Genes. Eriksson, M., Moseley, J. L, Tottey, S., del Campo, J. A, Quinn, J., Kim, Y., & Merchant, S. Genetics, 168(2): 795–807. October 2004.
Genetic Dissection of Nutritional Copper Signaling in Chlamydomonas Distinguishes Regulatory and Target Genes [link]Paper   doi   link   bibtex   abstract  
Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications. Hilson, P., Allemeersch, J., Altmann, T., Aubourg, S., Avon, A., Beynon, J., Bhalerao, R. P., Bitton, F., Caboche, M., Cannoot, B., Chardakov, V., Cognet-Holliger, C., Colot, V., Crowe, M., Darimont, C., Durinck, S., Eickhoff, H., Longevialle, A. F. d., Farmer, E. E., Grant, M., Kuiper, M. T. R., Lehrach, H., Léon, C., Leyva, A., Lundeberg, J., Lurin, C., Moreau, Y., Nietfeld, W., Paz-Ares, J., Reymond, P., Rouzé, P., Sandberg, G., Segura, M. D., Serizet, C., Tabrett, A., Taconnat, L., Thareau, V., Hummelen, P. V., Vercruysse, S., Vuylsteke, M., Weingartner, M., Weisbeek, P. J., Wirta, V., Wittink, F. R. A., Zabeau, M., & Small, I. Genome Research, 14(10b): 2176–2189. October 2004. Company: Cold Spring Harbor Laboratory Press Distributor: Cold Spring Harbor Laboratory Press Institution: Cold Spring Harbor Laboratory Press Label: Cold Spring Harbor Laboratory Press Publisher: Cold Spring Harbor Lab
Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications [link]Paper   doi   link   bibtex   abstract  
Population subdivision and the Hudson–Kreitman–Aguade test: testing for deviations from the neutral model in organelle genomes. Ingvarsson, P. K. Genetics Research, 83(1): 31–39. February 2004. Publisher: Cambridge University Press
Population subdivision and the Hudson–Kreitman–Aguade test: testing for deviations from the neutral model in organelle genomes [link]Paper   doi   link   bibtex   abstract  
Intermittent low temperatures constrain spring recovery of photosynthesis in boreal Scots pine forests. Ensminger, I., Sveshnikov, D., Campbell, D. A., Funk, C., Jansson, S., Lloyd, J., Shibistova, O., & Oquist, G. Global Change Biology, 10(6): 995–1008. June 2004. Place: Hoboken Publisher: Wiley WOS:000221741800006
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Prediction and spectral profile estimation in multivariate calibration. Trygg, J. Journal of Chemometrics, 18(3-4): 166–172. April 2004. Place: Hoboken Publisher: Wiley WOS:000223467300007
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Strategies for implementation and validation of on-line models for multivariate monitoring and control of wood chip properties. Jonsson, P., Sjostrom, M., Wallbacks, L., & Antti, H. Journal of Chemometrics, 18(3-4): 203–207. April 2004. Place: Hoboken Publisher: Wiley WOS:000223467300011
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Nitrogen-induced changes in phenolics of Vaccinium myrtillus - Implications for interaction with a parasitic fungus. Witzell, J., & Shevtsova, A. Journal of Chemical Ecology, 30(10): 1937–1956. October 2004. Place: Dordrecht Publisher: Springer WOS:000224670400004
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Multiple Deletions of Small Cab-like Proteins in the Cyanobacterium Synechocystis sp. PCC 6803: CONSEQUENCES FOR PIGMENT BIOSYNTHESIS AND ACCUMULATION*. Xu, H., Vavilin, D., Funk, C., & Vermaas, W. Journal of Biological Chemistry, 279(27): 27971–27979. July 2004.
Multiple Deletions of Small Cab-like Proteins in the Cyanobacterium Synechocystis sp. PCC 6803: CONSEQUENCES FOR PIGMENT BIOSYNTHESIS AND ACCUMULATION* [link]Paper   doi   link   bibtex   abstract  
Balancing seed yield and breeding value in clonal seed orchards. Lindgren, D., Cui, J. G., Son, S. G., & Sonesson, J. New Forests, 28(1): 11–22. July 2004. Place: Dordrecht Publisher: Kluwer Academic Publ WOS:000221938600002
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Isolation of outer membrane of Synechocystis sp PCC 6803 and its proteomic characterization. Huang, F., Hedman, E., Funk, C., Kieselbach, T., Schroder, W. P., & Norling, B. Molecular & Cellular Proteomics, 3(6): 586–595. June 2004. Place: Rockville Publisher: Amer Soc Biochemistry Molecular Biology Inc WOS:000222029100007
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A conditional marker gene allowing both positive and negative selection in plants. Erikson, O., Hertzberg, M., & Nasholm, T. Nature Biotechnology, 22(4): 455–458. April 2004. Place: New York Publisher: Nature Publishing Group WOS:000220610100036
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Respiratory acclimation in Arabidopsis thaliana leaves at low temperature. Talts, P., Parnik, T., Gardestrom, P., & Keerberg, O. Journal of Plant Physiology, 161(5): 573–579. May 2004. Place: Munich Publisher: Elsevier Gmbh WOS:000221613300009
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Hole burning study of cyanobacterial Photosystem II complexes differing in the content of small putative chlorophyll-binding proteins. Dedic, R., Promnares, K., Psencik, J., Svoboda, A., Korinek, M., Tichy, M., Komenda, J., Funk, C., & Hala, J. Journal of Luminescence, 107(1-4): 230–235. May 2004. Place: Amsterdam Publisher: Elsevier WOS:000220706100031
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Changes in the carrot (Daucus carota L. cv. Nerac) cell wall during storage. Galindo, F. G., Brathen, E., Knutsen, S. H., Sommarin, M., Gekas, V., & Sjoholm, I. Food Research International, 37(3): 225–232. 2004. Place: Amsterdam Publisher: Elsevier WOS:000220123100004
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A hydrogen-evolving enzyme is present in Frankia sp. R43. Mohapatra, A., Leul, M., Mattsson, U., & Sellstedt, A. FEMS Microbiology Letters, 236(2): 235–240. July 2004.
A hydrogen-evolving enzyme is present in Frankia sp. R43 [link]Paper   doi   link   bibtex   abstract  
The transit peptide of CP29 thylakoid protein in Chlamydomonas reinhardtii is not removed but undergoes acetylation and phosphorylation. Turkina, M. V., Villarejo, A., & Vener, A. V. FEBS Letters, 564(1-2): 104–108. 2004. _eprint: https://febs.onlinelibrary.wiley.com/doi/pdf/10.1016/S0014-5793%2804%2900323-0
The transit peptide of CP29 thylakoid protein in Chlamydomonas reinhardtii is not removed but undergoes acetylation and phosphorylation [link]Paper   doi   link   bibtex   abstract  
A quantitative genetic method for estimating developmental instability. Waldmann, P. Evolution; International Journal of Organic Evolution, 58(2): 238–244. February 2004.
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Influence of cold acclimation on the mechanical strength of carrot (Daucus carota L.) tissue. Galindo, F. G., Vaughan, D., Herppich, W., Smallwood, M., Sommarin, M., Gekas, V., & Sjoholm, I. European Journal of Horticultural Science, 69(6): 229–234. December 2004. Place: Leuven Publisher: Int Soc Horticultural Science-Ishs WOS:000226796000002
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gurke and pasticcino3 mutants affected in embryo development are impaired in acetyl-CoA carboxylase. Baud, S., Bellec, Y., Miquel, M., Bellini, C., Caboche, M., Lepiniec, L., Faure, J., & Rochat, C. EMBO reports, 5(5): 515–520. May 2004. Publisher: John Wiley & Sons, Ltd
gurke and pasticcino3 mutants affected in embryo development are impaired in acetyl-CoA carboxylase [link]Paper   doi   link   bibtex   abstract  
Nitrogen fixation increases with successional age in boreal forests. Zackrisson, O., DeLuca, T. H., Nilsson, M. C., Sellstedt, A., & Berglund, L. M. Ecology, 85(12): 3327–3334. December 2004. Place: Hoboken Publisher: Wiley WOS:000226297500014
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Nitrogen uptake by arctic soil microbes and plants in relation to soil nitrogen supply. Nordin, A., Schmidt, I. K., & Shaver, G. R. Ecology, 85(4): 955–962. April 2004. Place: Washington Publisher: Ecological Soc Amer WOS:000220766600007
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Global analysis of low-molecular-weight compounds in human plasma using GC/TOF-MS. Jiye, A., Trygg, J., Gullberg, J., Moritz, T., & Marklund, S. Drug Metabolism Reviews, 36: 246–246. August 2004. Place: Philadelphia Publisher: Taylor & Francis Inc WOS:000224023200489
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Plastid-to-nucleus signalling. Strand, Å. Current Opinion in Plant Biology, 7(6): 621–625. December 2004.
Plastid-to-nucleus signalling [link]Paper   doi   link   bibtex   abstract  
Light, not nitrogen, limits growth of the grass Deschampsia flexuosa in boreal forests. Strengbom, J., Nasholm, T., & Ericson, L. Canadian Journal of Botany-Revue Canadienne De Botanique, 82(4): 430–435. April 2004. Place: Ottawa Publisher: Canadian Science Publishing WOS:000222035300002
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BAPS 2: enhanced possibilities for the analysis of genetic population structure. Corander, J., Waldmann, P., Marttinen, P., & Sillanpää, M. J. Bioinformatics, 20(15): 2363–2369. October 2004.
BAPS 2: enhanced possibilities for the analysis of genetic population structure [link]Paper   doi   link   bibtex   abstract  
Ups and downs of tissue and planar polarity in plants. Grebe, M. BioEssays, 26(7): 719–729. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1002/bies.20065
Ups and downs of tissue and planar polarity in plants [link]Paper   doi   link   bibtex   abstract  
The low molecular mass subunits of the photosynthetic supracomplex, photosystem II. Shi, L. X., & Schroder, W. P. Biochimica Et Biophysica Acta-Bioenergetics, 1608(2-3): 75–96. February 2004. Place: Amsterdam Publisher: Elsevier Science Bv WOS:000220012300001
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Screening for efficient cold hardening in a breeding population of Salix using near infrared reflectance spectroscopy. Lennartsson, M., & Ogren, E. Annals of Forest Science, 61(5): 449–454. August 2004. Place: Paris Publisher: Springer France WOS:000225059100007
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Interrelationships between water use and growth traits in biomass-producing willows. Wikberg, J., & Ogren, E. Trees-Structure and Function, 18(1): 70–76. January 2004. Place: New York Publisher: Springer-Verlag WOS:000187549100009
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Photosynthetic responses to short-term and long-term light variation in Pinus sylvestris and Salix dasyclados. Hjelm, U., & Ogren, E. Trees-Structure and Function, 18(6): 622–629. November 2004. Place: New York Publisher: Springer WOS:000224755300002
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Open-nucleus breeding strategies compared with population-wide positive assortative mating. Lstibůrek, M., Mullin, T. J., Lindgren, D., & Rosvall, O. Theoretical and Applied Genetics, 109(6): 1169–1177. October 2004.
Open-nucleus breeding strategies compared with population-wide positive assortative mating [link]Paper   doi   link   bibtex   abstract  
Open-nucleus breeding strategies compared with population-wide positive assortative mating. Lstibůrek, M., Mullin, T. J., Lindgren, D., & Rosvall, O. Theoretical and Applied Genetics, 109(6): 1196–1203. October 2004.
Open-nucleus breeding strategies compared with population-wide positive assortative mating [link]Paper   doi   link   bibtex   abstract  
Clonal Variation in Temperature Requirements for Budburst and Dehardening in Salix Species Used for Biomass Production. Lennartsson, M., & Ögren, E. Scandinavian Journal of Forest Research, 19(4): 295–302. July 2004. Publisher: Taylor & Francis _eprint: https://doi.org/10.1080/02827580410030145
Clonal Variation in Temperature Requirements for Budburst and Dehardening in Salix Species Used for Biomass Production [link]Paper   doi   link   bibtex   abstract  
Genetic analysis of fibre size in a full-sib Pinus sylvestris L. progeny test. Ericsson, T., & Fries, A. Scandinavian Journal of Forest Research, 19(1): 7–13. February 2004. Publisher: Taylor & Francis _eprint: https://doi.org/10.1080/02827580310019031
Genetic analysis of fibre size in a full-sib Pinus sylvestris L. progeny test [link]Paper   doi   link   bibtex   abstract  
Three-block bi-focal PLS (3BIF-PLS) and its application in QSAR. Eriksson, L., Damborsky, J., Earll, M., Johansson, E., Trygg, J., & Wold, S. SAR and QSAR in Environmental Research, 15(5-6): 481–499. October 2004. Publisher: Taylor & Francis _eprint: https://doi.org/10.1080/10629360412331297452
Three-block bi-focal PLS (3BIF-PLS) and its application in QSAR [link]Paper   doi   link   bibtex   abstract  
The PRC-barrel domain of the ribosome maturation protein RimM mediates binding to ribosomal protein S19 in the 30S ribosomal subunits. Lovgren, J. M., Bylund, G. O., Srivastava, M. K., Lundberg, L. a. C., Persson, O. P., Wingsle, G., & Wikstrom, P. M. Rna, 10(11): 1798–1812. November 2004. Place: Cold Spring Harbor Publisher: Cold Spring Harbor Lab Press, Publications Dept WOS:000224746300015
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Lesion simulating disease 1 - Is required for acclimation to conditions that promote excess excitation energy. Mateo, A., Muhlenbock, P., Rusterucci, C., Chang, C. C. C., Miszalski, Z., Karpinska, B., Parker, J. E., Mullineaux, P. M., & Karpinski, S. Plant Physiology, 136(1): 2818–2830. September 2004. Place: Rockville Publisher: Amer Soc Plant Biologists WOS:000223962100034
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A Populus EST resource for plant functional genomics. Sterky, F., Bhalerao, R. R., Unneberg, P., Segerman, B., Nilsson, P., Brunner, A. M., Charbonnel-Campaa, L., Lindvall, J. J., Tandre, K., Strauss, S. H., Sundberg, B., Gustafsson, P., Uhlén, M., Bhalerao, R. P., Nilsson, O., Sandberg, G., Karlsson, J., Lundeberg, J., & Jansson, S. Proceedings of the National Academy of Sciences, 101(38): 13951–13956. September 2004. Publisher: National Academy of Sciences Section: Biological Sciences
A Populus EST resource for plant functional genomics [link]Paper   doi   link   bibtex   abstract  
Auxin regulation of cytokinin biosynthesis in Arabidopsis thaliana: A factor of potential importance for auxin–cytokinin-regulated development. Nordström, A., Tarkowski, P., Tarkowska, D., Norbaek, R., Åstot, C., Dolezal, K., & Sandberg, G. Proceedings of the National Academy of Sciences, 101(21): 8039–8044. May 2004. Publisher: National Academy of Sciences Section: Biological Sciences
Auxin regulation of cytokinin biosynthesis in Arabidopsis thaliana: A factor of potential importance for auxin–cytokinin-regulated development [link]Paper   doi   link   bibtex   abstract  
In planta functions of the Arabidopsis cytokinin receptor family. Higuchi, M., Pischke, M. S., Mähönen, A. P., Miyawaki, K., Hashimoto, Y., Seki, M., Kobayashi, M., Shinozaki, K., Kato, T., Tabata, S., Helariutta, Y., Sussman, M. R., & Kakimoto, T. Proceedings of the National Academy of Sciences, 101(23): 8821–8826. June 2004. Publisher: National Academy of Sciences Section: Biological Sciences
In planta functions of the Arabidopsis cytokinin receptor family [link]Paper   doi   link   bibtex   abstract  
A specific form of thioredoxin h occurs in plant mitochondria and regulates the alternative oxidase. Gelhaye, E., Rouhier, N., Gérard, J., Jolivet, Y., Gualberto, J., Navrot, N., Ohlsson, P., Wingsle, G., Hirasawa, M., Knaff, D. B., Wang, H., Dizengremel, P., Meyer, Y., & Jacquot, J. Proceedings of the National Academy of Sciences, 101(40): 14545–14550. October 2004. Publisher: National Academy of Sciences Section: Biological Sciences
A specific form of thioredoxin h occurs in plant mitochondria and regulates the alternative oxidase [link]Paper   doi   link   bibtex   abstract  
Organic and inorganic nitrogen uptake in lichens. Dahlman, L., Persson, J., Palmqvist, K., & Näsholm, T. Planta, 219(3): 459–467. July 2004.
Organic and inorganic nitrogen uptake in lichens [link]Paper   doi   link   bibtex   abstract  
Expression of bovine calmodulin in tobacco plants confers faster germination on saline media. Olsson, P., Yilmaz, J. L., Sommarin, M., Persson, S., & Bulow, L. Plant Science, 166(6): 1595–1604. June 2004. Place: Clare Publisher: Elsevier Ireland Ltd WOS:000221136600023
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A Family of Auxin-Conjugate Hydrolases That Contributes to Free Indole-3-Acetic Acid Levels during Arabidopsis Germination. Rampey, R. A., LeClere, S., Kowalczyk, M., Ljung, K., Sandberg, G., & Bartel, B. Plant Physiology, 135(2): 978–988. June 2004.
A Family of Auxin-Conjugate Hydrolases That Contributes to Free Indole-3-Acetic Acid Levels during Arabidopsis Germination [link]Paper   doi   link   bibtex   abstract  
A Weed for Wood? Arabidopsis as a Genetic Model for Xylem Development. Nieminen, K. M., Kauppinen, L., & Helariutta, Y. Plant Physiology, 135(2): 653–659. June 2004.
A Weed for Wood? Arabidopsis as a Genetic Model for Xylem Development [link]Paper   doi   link   bibtex   abstract  
Expansins Abundant in Secondary Xylem Belong to Subgroup A of the α-Expansin Gene Family. Gray-Mitsumune, M., Mellerowicz, E. J., Abe, H., Schrader, J., Winzéll, A., Sterky, F., Blomqvist, K., McQueen-Mason, S., Teeri, T. T., & Sundberg, B. Plant Physiology, 135(3): 1552–1564. July 2004.
Expansins Abundant in Secondary Xylem Belong to Subgroup A of the α-Expansin Gene Family [link]Paper   doi   link   bibtex   abstract  
UDP-Glucose Pyrophosphorylase. An Old Protein with New Tricks. Kleczkowski, L. A., Geisler, M., Ciereszko, I., & Johansson, H. Plant Physiology, 134(3): 912–918. March 2004.
UDP-Glucose Pyrophosphorylase. An Old Protein with New Tricks [link]Paper   doi   link   bibtex  
Cloning and Overproduction of Gibberellin 3-Oxidase in Hybrid Aspen Trees. Effects on Gibberellin Homeostasis and Development. Israelsson, M., Mellerowicz, E., Chono, M., Gullberg, J., & Moritz, T. Plant Physiology, 135(1): 221–230. May 2004.
Cloning and Overproduction of Gibberellin 3-Oxidase in Hybrid Aspen Trees. Effects on Gibberellin Homeostasis and Development [link]Paper   doi   link   bibtex   abstract  
Patterns of Auxin Distribution during Gravitational Induction of Reaction Wood in Poplar and Pine. Hellgren, J. M., Olofsson, K., & Sundberg, B. Plant Physiology, 135(1): 212–220. May 2004. Publisher: Oxford Academic
Patterns of Auxin Distribution during Gravitational Induction of Reaction Wood in Poplar and Pine [link]Paper   doi   link   bibtex   abstract  
Is Each Light-Harvesting Complex Protein Important for Plant Fitness?. Ganeteg, U., Külheim, C., Andersson, J., & Jansson, S. Plant Physiology, 134(1): 502–509. January 2004.
Is Each Light-Harvesting Complex Protein Important for Plant Fitness? [link]Paper   doi   link   bibtex   abstract  
AtGA3ox2, a Key Gene Responsible for Bioactive Gibberellin Biosynthesis, Is Regulated during Embryogenesis by LEAFY COTYLEDON2 and FUSCA3 in Arabidopsis. Curaba, J., Moritz, T., Blervaque, R., Parcy, F., Raz, V., Herzog, M., & Vachon, G. Plant Physiology, 136(3): 3660–3669. November 2004.
AtGA3ox2, a Key Gene Responsible for Bioactive Gibberellin Biosynthesis, Is Regulated during Embryogenesis by LEAFY COTYLEDON2 and FUSCA3 in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
The Roles of Ethylene, Auxin, Abscisic Acid, and Gibberellin in the Hyponastic Growth of Submerged Rumex palustris Petioles. Cox, M. C., Benschop, J. J., Vreeburg, R. A., Wagemaker, C. A., Moritz, T., Peeters, A. J., & Voesenek, L. A. Plant Physiology, 136(2): 2948–2960. October 2004.
The Roles of Ethylene, Auxin, Abscisic Acid, and Gibberellin in the Hyponastic Growth of Submerged Rumex palustris Petioles [link]Paper   doi   link   bibtex   abstract  
Toward a blueprint for UDP-glucose pyrophosphorylase structure/function properties: homology-modeling analyses. Geisler, M., Wilczynska, M., Karpinski, S., & Kleczkowski, L. A. Plant Molecular Biology, 56(5): 783–794. November 2004.
Toward a blueprint for UDP-glucose pyrophosphorylase structure/function properties: homology-modeling analyses [link]Paper   doi   link   bibtex   abstract  
Lhca5 – an LHC-Type Protein Associated with Photosystem I. Ganeteg, U., Klimmek, F., & Jansson, S. Plant Molecular Biology, 54(5): 641–651. March 2004.
Lhca5 – an LHC-Type Protein Associated with Photosystem I [link]Paper   doi   link   bibtex   abstract  
Mutual antagonism of ethylene and jasmonic acid regulates ozone-induced spreading cell death in Arabidopsis. Tuominen, H., Overmyer, K., Keinänen, M., Kollist, H., & Kangasjärvi, J. The Plant Journal, 39(1): 59–69. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2004.02107.x
Mutual antagonism of ethylene and jasmonic acid regulates ozone-induced spreading cell death in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome. Schrader, J., Moyle, R., Bhalerao, R., Hertzberg, M., Lundeberg, J., Nilsson, P., & Bhalerao, R. P. The Plant Journal, 40(2): 173–187. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2004.02199.x
Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome [link]Paper   doi   link   bibtex   abstract  
Differential stage-specific regulation of cyclin-dependent kinases during cambial dormancy in hybrid aspen. Espinosa-Ruiz, A., Saxena, S., Schmidt, J., Mellerowicz, E., Miskolczi, P., Bakó, L., & Bhalerao, R. P. The Plant Journal, 38(4): 603–615. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2004.02070.x
Differential stage-specific regulation of cyclin-dependent kinases during cambial dormancy in hybrid aspen [link]Paper   doi   link   bibtex   abstract  
Induction of ASCORBATE PEROXIDASE 2 expression in wounded Arabidopsis leaves does not involve known wound-signalling pathways but is associated with changes in photosynthesis. Chang, C. C., Ball, L., Fryer, M. J., Baker, N. R., Karpinski, S., & Mullineaux, P. M. The Plant Journal, 38(3): 499–511. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2004.02066.x
Induction of ASCORBATE PEROXIDASE 2 expression in wounded Arabidopsis leaves does not involve known wound-signalling pathways but is associated with changes in photosynthesis [link]Paper   doi   link   bibtex   abstract  
Organellar gene transcription and early seedling development are affected in the rpoT;2 mutant of Arabidopsis. Baba, K., Schmidt, J., Espinosa-Ruiz, A., Villarejo, A., Shiina, T., Gardeström, P., Sane, A. P., & Bhalerao, R. P. The Plant Journal, 38(1): 38–48. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2004.02022.x
Organellar gene transcription and early seedling development are affected in the rpoT;2 mutant of Arabidopsis [link]Paper   doi   link   bibtex   abstract  
A Salinity-Induced C3-CAM Transition Increases Energy Conservation in the Halophyte Mesembryanthemum crystallinum L. Niewiadomska, E., Karpinska, B., Romanowska, E., Slesak, I., & Karpinski, S. Plant and Cell Physiology, 45(6): 789–794. June 2004.
A Salinity-Induced C3-CAM Transition Increases Energy Conservation in the Halophyte Mesembryanthemum crystallinum L. [link]Paper   doi   link   bibtex   abstract  
Plasma Membrane H+-ATPase and 14-3-3 Isoforms of Arabidopsis Leaves: Evidence for Isoform Specificity in the 14-3-3/H+-ATPase Interaction. Alsterfjord, M., Sehnke, P. C., Arkell, A., Larsson, H., Svennelid, F., Rosenquist, M., Ferl, R. J., Sommarin, M., & Larsson, C. Plant and Cell Physiology, 45(9): 1202–1210. September 2004.
Plasma Membrane H+-ATPase and 14-3-3 Isoforms of Arabidopsis Leaves: Evidence for Isoform Specificity in the 14-3-3/H+-ATPase Interaction [link]Paper   doi   link   bibtex   abstract  
Structure-Function Analysis of the Presumptive Arabidopsis Auxin Permease AUX1[W]. Swarup, R., Kargul, J., Marchant, A., Zadik, D., Rahman, A., Mills, R., Yemm, A., May, S., Williams, L., Millner, P., Tsurumi, S., Moore, I., Napier, R., Kerr, I. D., & Bennett, M. J. The Plant Cell, 16(11): 3069–3083. November 2004.
Structure-Function Analysis of the Presumptive Arabidopsis Auxin Permease AUX1[W] [link]Paper   doi   link   bibtex   abstract  
A High-Resolution Transcript Profile across the Wood-Forming Meristem of Poplar Identifies Potential Regulators of Cambial Stem Cell Identity[W]. Schrader, J., Nilsson, J., Mellerowicz, E., Berglund, A., Nilsson, P., Hertzberg, M., & Sandberg, G. The Plant Cell, 16(9): 2278–2292. September 2004.
A High-Resolution Transcript Profile across the Wood-Forming Meristem of Poplar Identifies Potential Regulators of Cambial Stem Cell Identity[W] [link]Paper   doi   link   bibtex   abstract  
Evidence for a Direct Link between Glutathione Biosynthesis and Stress Defense Gene Expression in Arabidopsis[W]. Ball, L., Accotto, G., Bechtold, U., Creissen, G., Funck, D., Jimenez, A., Kular, B., Leyland, N., Mejia-Carranza, J., Reynolds, H., Karpinski, S., & Mullineaux, P. M. The Plant Cell, 16(9): 2448–2462. September 2004.
Evidence for a Direct Link between Glutathione Biosynthesis and Stress Defense Gene Expression in Arabidopsis[W] [link]Paper   doi   link   bibtex   abstract  
Arabidopsis RADICAL-INDUCED CELL DEATH1 Belongs to the WWE Protein–Protein Interaction Domain Protein Family and Modulates Abscisic Acid, Ethylene, and Methyl Jasmonate Responses. Ahlfors, R., Lång, S., Overmyer, K., Jaspers, P., Broscheé, M., Tauriainen, A., Kollist, H., Tuominen, H., Belles-Boix, E., Piippo, M., Inzeé, D., Palva, E. T., & Kangasjärvi, J. The Plant Cell, 16(7): 1925–1937. July 2004. Publisher: Oxford Academic
Arabidopsis RADICAL-INDUCED CELL DEATH1 Belongs to the WWE Protein–Protein Interaction Domain Protein Family and Modulates Abscisic Acid, Ethylene, and Methyl Jasmonate Responses [link]Paper   doi   link   bibtex   abstract  
Liquid Phase Fluorescence in situ RT-PCR Analysis for Gene Expression Analysis in Woody Stems. Gray-Mitsumune, M., Abe, H., Takahashi, J., Sundberg, B., & Mellerowicz, E. J. Plant Biology, 6(1): 47–54. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1055/s-2003-44747
Liquid Phase Fluorescence in situ RT-PCR Analysis for Gene Expression Analysis in Woody Stems [link]Paper   doi   link   bibtex   abstract  
Nitrogenase activity and root nodule metabolism in response to O-2 and short-term N-2 deprivation in dark-treated Frankia-Alnus incana plants (vol 119, pg 244, 2003). Lundquist, P. O., Nasholm, T., & Huss-Danell, K. Physiologia Plantarum, 120(1): 171–171. January 2004. Place: Copenhagen Publisher: Blackwell Munksgaard WOS:000187890700020
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Gibberellins and the floral transition in Sinapis alba. Corbesier, L., Kustermans, G., Perilleux, C., Melzer, S., Moritz, T., Havelange, A., & Bernier, G. Physiologia Plantarum, 122(1): 152–158. September 2004. Place: Hoboken Publisher: Wiley WOS:000223589000018
doi   link   bibtex   abstract  
Photorespiration contributes to stomatal regulation and carbon isotope fractionation: a study with barley, potato and Arabidopsis plants deficient in glycine decarboxylase. Igamberdiev, A. U., Mikkelsen, T. N., Ambus, P., Bauwe, H., Lea, P. J., & Gardestrom, P. Photosynthesis Research, 81(2): 139–152. 2004. Place: Dordrecht Publisher: Springer WOS:000222680700004
doi   link   bibtex   abstract  
Carbonic Anhydrase Activities in Pea Thylakoids. Moskvin, O., Shutova, T., Khristin, M., Ignatova, L., Villarejo, A., Samuelsson, G., Klimov, V., & Ivanov, B. Photosynthesis Research, 79(1): 93–100. January 2004.
Carbonic Anhydrase Activities in Pea Thylakoids [link]Paper   doi   link   bibtex   abstract  
Slugs, willow seedlings and nutrient fertilization: intrinsic vigor inversely affects palatability. Albrectsen, B. R., Gardfjell, H., Orians, C. M., Murray, B., & Fritz, R. S. Oikos, 105(2): 268–278. May 2004. Place: Hoboken Publisher: Wiley-Blackwell WOS:000220383100007
doi   link   bibtex   abstract  
The response of the poplar transcriptome to wounding and subsequent infection by a viral pathogen. Smith, C. M., Rodriguez-Buey, M., Karlsson, J., & Campbell, M. M. New Phytologist, 164(1): 123–136. October 2004. Place: Hoboken Publisher: Wiley WOS:000223662000013
doi   link   bibtex   abstract  
Gene-specific expression and calcium activation of Arabidopsis thaliana phospholipase C isoforms. Hunt, L., Otterhag, L., Lee, J. C., Lasheen, T., Hunt, J., Seki, M., Shinozaki, K., Sornmarin, M., Gilmour, D. J., Pical, C., & Gray, J. E. New Phytologist, 162(3): 643–654. June 2004. Place: Malden Publisher: Wiley-Blackwell WOS:000221913500007
doi   link   bibtex   abstract  
Revisiting tree maturation and floral initiation in the poplar functional genomics era. Brunner, A. M., & Nilsson, O. New Phytologist, 164(1): 43–51. October 2004. Place: Hoboken Publisher: Wiley WOS:000223662000006
doi   link   bibtex   abstract  
A Previously Unknown Maltose Transporter Essential for Starch Degradation in Leaves. Niittylä, T., Messerli, G., Trevisan, M., Chen, J., Smith, A. M., & Zeeman, S. C. Science, 303(5654): 87–89. January 2004. Publisher: American Association for the Advancement of Science Section: Report
A Previously Unknown Maltose Transporter Essential for Starch Degradation in Leaves [link]Paper   doi   link   bibtex   abstract  
Variation in transcript abundance during somatic embryogenesis in gymnosperms. Stasolla, C., Bozhkov, P. V., Chu, T., van Zyl, L., Egertsdotter, U., Suarez, M. F., Craig, D., Wolfinger, R. D., Von Arnold, S., & Sederoff, R. R. Tree Physiology, 24(10): 1073–1085. October 2004. Publisher: Oxford Academic
Variation in transcript abundance during somatic embryogenesis in gymnosperms [link]Paper   doi   link   bibtex   abstract  
Multiple gene detection by in situ RT-PCR in isolated plant cells and tissues. Pesquet, E., Barbier, O., Ranocha, P., Jauneau, A., & Goffner, D. The Plant Journal, 39(6): 947–959. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2004.02170.x
Multiple gene detection by in situ RT-PCR in isolated plant cells and tissues [link]Paper   doi   link   bibtex   abstract  
Gene Expression during Formation of Earlywood and Latewood in Loblolly Pine: Expression Profiles of 350 Genes. Egertsdotter, U., Zyl, L. M. v., MacKay, J., Peter, G., Kirst, M., Clark, C., Whetten, R., & Sederoff, R. Plant Biology, 6(6): 654–663. 2004. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1055/s-2004-830383
Gene Expression during Formation of Earlywood and Latewood in Loblolly Pine: Expression Profiles of 350 Genes [link]Paper   doi   link   bibtex   abstract  
Geographic pattern of local optimality in natural populations of lodgepole pine. Wu, H. X., & Ying, C. C. Forest Ecology and Management, 194(1): 177–198. June 2004.
Geographic pattern of local optimality in natural populations of lodgepole pine [link]Paper   doi   link   bibtex   abstract  
General and specific combining ability from partial diallels of radiata pine: implications for utility of SCA in breeding and deployment populations. Wu, H. X., & Matheson, A. C. Theoretical and Applied Genetics, 108(8): 1503–1512. May 2004.
General and specific combining ability from partial diallels of radiata pine: implications for utility of SCA in breeding and deployment populations [link]Paper   doi   link   bibtex   abstract  
The mechanism and regulation of cellulose synthesis in primary walls: lessons from cellulose-deficient Arabidopsis mutants. Robert, S., Mouille, G., & Höfte, H. Cellulose, 11(3): 351–364. September 2004.
The mechanism and regulation of cellulose synthesis in primary walls: lessons from cellulose-deficient Arabidopsis mutants [link]Paper   doi   link   bibtex   abstract