2024 (30)
NKS1/ELMO4 is an integral protein of a pectin synthesis protein complex and maintains Golgi morphology and cell adhesion in Arabidopsis. Lathe, R. S., McFarlane, H. E., Kesten, C., Wang, L., Khan, G. A., Ebert, B., Ramírez-Rodríguez, E. A., Zheng, S., Noord, N., Frandsen, K., Bhalerao, R. P., & Persson, S. Proceedings of the National Academy of Sciences, 121(15): e2321759121. April 2024. Publisher: Proceedings of the National Academy of Sciences
NKS1/ELMO4 is an integral protein of a pectin synthesis protein complex and maintains Golgi morphology and cell adhesion in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization. Hoermayer, L., Montesinos, J. C., Trozzi, N., Spona, L., Yoshida, S., Marhava, P., Caballero-Mancebo, S., Benková, E., Heisenberg, C., Dagdas, Y., Majda, M., & Friml, J. Developmental Cell. April 2024.
Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization [link]Paper   doi   link   bibtex   abstract  
ABI5 binding proteins: key players in coordinating plant growth and development. Vittozzi, Y., Krüger, T., Majee, A., Née, G., & Wenkel, S. Trends in Plant Science, 0(0). April 2024. Publisher: Elsevier
ABI5 binding proteins: key players in coordinating plant growth and development [link]Paper   doi   link   bibtex  
Genomic Prediction for Inbred and Hybrid Polysomic Tetraploid Potato Offspring. Ortiz, R., Reslow, F., Vetukuri, R., García-Gil, M. R., Pérez-Rodríguez, P., & Crossa, J. Agriculture, 14(3): 455. March 2024. Number: 3 Publisher: Multidisciplinary Digital Publishing Institute
Genomic Prediction for Inbred and Hybrid Polysomic Tetraploid Potato Offspring [link]Paper   doi   link   bibtex   abstract  
Evolutionary radiation of the Eurasian Pinus species under pervasive gene flow. Zhao, W., Gao, J., Hall, D., Andersson, B. A., Bruxaux, J., Tomlinson, K. W., Drouzas, A. D., Suyama, Y., & Wang, X. New Phytologist. March 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/nph.19694
Evolutionary radiation of the Eurasian Pinus species under pervasive gene flow [link]Paper   doi   link   bibtex   abstract  
Genomic basis of the distinct biosynthesis of β-glucogallin, a biochemical marker for hydrolyzable tannin production, in three oak species. Yang, Q., Li, J., Wang, Y., Wang, Z., Pei, Z., Street, N. R., Bhalerao, R. P., Yu, Z., Gao, Y., Ni, J., Jiao, Y., Sun, M., Yang, X., Chen, Y., Liu, P., Wang, J., Liu, Y., & Li, G. New Phytologist. March 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/nph.19711
Genomic basis of the distinct biosynthesis of β-glucogallin, a biochemical marker for hydrolyzable tannin production, in three oak species [link]Paper   doi   link   bibtex   abstract  
Multiple Roles of Glycerate Kinase—From Photorespiration to Gluconeogenesis, C4 Metabolism, and Plant Immunity. Kleczkowski, L. A., & Igamberdiev, A. U. International Journal of Molecular Sciences, 25(6): 3258. March 2024. Number: 6 Publisher: Multidisciplinary Digital Publishing Institute
Multiple Roles of Glycerate Kinase—From Photorespiration to Gluconeogenesis, C4 Metabolism, and Plant Immunity [link]Paper   doi   link   bibtex   abstract  
‘Seeing’ the electromagnetic spectrum: spotlight on the cryptochrome photocycle. Aguida, B., Babo, J., Baouz, S., Jourdan, N., Procopio, M., El-Esawi, M. A., Engle, D., Mills, S., Wenkel, S., Huck, A., Berg-Sørensen, K., Kampranis, S. C., Link, J., & Ahmad, M. Frontiers in Plant Science, 15. March 2024.
‘Seeing’ the electromagnetic spectrum: spotlight on the cryptochrome photocycle [link]Paper   doi   link   bibtex   abstract  
Trade-offs and Trait Integration in Tree Phenotypes: Consequences for the Sustainable Use of Genetic Resources. Climent, J., Alía, R., Karkkainen, K., Bastien, C., Benito-Garzon, M., Bouffier, L., De Dato, G., Delzon, S., Dowkiw, A., Elvira-Recuenco, M., Grivet, D., González-Martínez, S. C., Hayatgheibi, H., Kujala, S., Leplé, J., Martín-Sanz, R. C., de Miguel, M., Monteverdi, M. C., Mutke, S., Plomion, C., Ramírez-Valiente, J. A., Sanchez, L., Solé-Medina, A., Soularue, J., Steffenrem, A., Teani, A., Westin, J., Whittet, R., Wu, H., Zas, R., & Cavers, S. Current Forestry Reports. March 2024.
Trade-offs and Trait Integration in Tree Phenotypes: Consequences for the Sustainable Use of Genetic Resources [link]Paper   doi   link   bibtex   abstract  
Pseudomonas syringae infectivity correlates to altered transcript and metabolite levels of Arabidopsis mediator mutants. Blomberg, J., Tasselius, V., Vergara, A., Karamat, F., Imran, Q. M., Strand, Å., Rosvall, M., & Björklund, S. Scientific Reports, 14(1): 6771. March 2024. Publisher: Nature Publishing Group
Pseudomonas syringae infectivity correlates to altered transcript and metabolite levels of Arabidopsis mediator mutants [link]Paper   doi   link   bibtex   abstract  
The super-pangenome of Populus unveil genomic facets for its adaptation and diversification in widespread forest trees. Shi, T., Zhang, X., Hou, Y., Jia, C., Dan, X., Zhang, Y., Jiang, Y., Lai, Q., Feng, J., Feng, J., Ma, T., Wu, J., Liu, S., Zhang, L., Long, Z., Chen, L., Street, N. R., Ingvarsson, P. K., Liu, J., Yin, T., & Wang, J. Molecular Plant. March 2024.
The super-pangenome of <i>Populus</i> unveil genomic facets for its adaptation and diversification in widespread forest trees [link]Paper   doi   link   bibtex   abstract  
Profiling of 1-aminocyclopropane-1-carboxylic acid and selected phytohormones in Arabidopsis using liquid chromatography-tandem mass spectrometry. Karady, M., Hladík, P., Cermanová, K., Jiroutová, P., Antoniadi, I., Casanova-Sáez, R., Ljung, K., & Novák, O. Plant Methods, 20(1): 41. March 2024.
Profiling of 1-aminocyclopropane-1-carboxylic acid and selected phytohormones in Arabidopsis using liquid chromatography-tandem mass spectrometry [link]Paper   doi   link   bibtex   abstract  
Fungal-Bacterial Combinations in Plant Health under Stress: Physiological and Biochemical Characteristics of the Filamentous Fungus Serendipita indica and the Actinobacterium Zhihengliuella sp. ISTPL4 under In Vitro Arsenic Stress. Sharma, N., Koul, M., Joshi, N. C., Dufossé, L., & Mishra, A. Microorganisms, 12(2): 405. February 2024. Number: 2 Publisher: Multidisciplinary Digital Publishing Institute
Fungal-Bacterial Combinations in Plant Health under Stress: Physiological and Biochemical Characteristics of the Filamentous Fungus Serendipita indica and the Actinobacterium Zhihengliuella sp. ISTPL4 under In Vitro Arsenic Stress [link]Paper   doi   link   bibtex   abstract  
Biohybrid Energy Storage Circuits Based on Electronically Functionalized Plant Roots. Parker, D., Dar, A. M., Armada-Moreira, A., Bernacka Wojcik, I., Rai, R., Mantione, D., & Stavrinidou, E. ACS Applied Materials & Interfaces. March 2024. Publisher: American Chemical Society
Biohybrid Energy Storage Circuits Based on Electronically Functionalized Plant Roots [link]Paper   doi   link   bibtex   abstract  
A proxitome-RNA-capture approach reveals that processing bodies repress coregulated hub genes. Liu, C., Mentzelopoulou, A., Hatzianestis, I. H, Tzagkarakis, E., Skaltsogiannis, V., Ma, X., Michalopoulou, V. A, Romero-Campero, F. J, Romero-Losada, A. B, Sarris, P. F, Marhavy, P., Bölter, B., Kanterakis, A., Gutierrez-Beltran, E., & Moschou, P. N The Plant Cell, 36(3): 559–584. March 2024.
A proxitome-RNA-capture approach reveals that processing bodies repress coregulated hub genes [link]Paper   doi   link   bibtex   abstract  
High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar. Shi, T., Jia, K., Bao, Y., Nie, S., Tian, X., Yan, X., Chen, Z., Li, Z., Zhao, S., Ma, H., Zhao, Y., Li, X., Zhang, R., Guo, J., Zhao, W., El-Kassaby, Y. A., Müller, N., Van de Peer, Y., Wang, X., Street, N. R., Porth, I., An, X., & Mao, J. Plant Physiology,kiae078. February 2024.
High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar [link]Paper   doi   link   bibtex   abstract  
Gene co-expression network analysis reveal core responsive genes in Parascaris univalens tissues following ivermectin exposure. Dube, F., Delhomme, N., Martin, F., Hinas, A., Åbrink, M., Svärd, S., & Tydén, E. PLOS ONE, 19(2): e0298039. February 2024. Publisher: Public Library of Science
Gene co-expression network analysis reveal core responsive genes in Parascaris univalens tissues following ivermectin exposure [link]Paper   doi   link   bibtex   abstract  
In situ seasonal patterns of root auxin concentrations and meristem length in an arctic sedge. Blume-Werry, G., Semenchuk, P., Ljung, K., Milbau, A., Novak, O., Olofsson, J., & Brunoni, F. New Phytologist. February 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/nph.19616
In situ seasonal patterns of root auxin concentrations and meristem length in an arctic sedge [link]Paper   doi   link   bibtex   abstract  
The effect of nitrogen source and levels on hybrid aspen tree physiology and wood formation. Renström, A., Choudhary, S., Gandla, M. L., Jönsson, L. J., Hedenström, M., Jämtgård, S., & Tuominen, H. Physiologia Plantarum, 176(1): e14219. February 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/ppl.14219
The effect of nitrogen source and levels on hybrid aspen tree physiology and wood formation [link]Paper   doi   link   bibtex   abstract  
Progress in phylogenetics, multi-omics and flower coloration studies in Rhododendron. Nie, S., Ma, H., Shi, T., Tian, X., El-Kassaby, Y. A., Porth, I., Yang, F., Mao, J., Nie, S., Ma, H., Shi, T., Tian, X., El-Kassaby, Y. A., Porth, I., Yang, F., & Mao, J. Ornamental Plant Research, 4(1). January 2024. Bandiera_abtest: a Cc_license_type: cc_by Cg_type: Maximum Academic Press Number: opr-0024-0001 Primary_atype: Ornamental Plant Research Publisher: Maximum Academic Press Subject_term: REVIEW Subject_term_id: REVIEW
Progress in phylogenetics, multi-omics and flower coloration studies in <i>Rhododendron</i> [link]Paper   doi   link   bibtex   abstract  
Shifts in microbial community composition and metabolism correspond with rapid soil carbon accumulation in response to 20 years of simulated nitrogen deposition. Forsmark, B., Bizjak, T., Nordin, A., Rosenstock, N., Wallander, H., & Gundale, M. Science of the Total Environment, 918(170741). February 2024.
doi   link   bibtex   abstract  
Differential gene expression and potential regulatory network of fatty acid biosynthesis during fruit and leaf development in yellowhorn (Xanthoceras sorbifolium), an oil-producing tree with significant deployment values. Shi, T., Ma, H., Wang, X., Liu, H., Yan, X., Tian, X., Li, Z., Bao, Y., Chen, Z., Zhao, S., Xiang, Q., Jia, K., Nie, S., Guan, W., & Mao, J. Frontiers in Plant Science, 14. January 2024.
Differential gene expression and potential regulatory network of fatty acid biosynthesis during fruit and leaf development in yellowhorn (Xanthoceras sorbifolium), an oil-producing tree with significant deployment values [link]Paper   link   bibtex   abstract  
Unveiling Molecular Signatures in Light-Induced Seed Germination: Insights from PIN3, PIN7, and AUX1 in Arabidopsis thaliana. Tognacca, R. S., Ljung, K., & Botto, J. F. Plants, 13(3): 408. January 2024. Number: 3 Publisher: Multidisciplinary Digital Publishing Institute
Unveiling Molecular Signatures in Light-Induced Seed Germination: Insights from PIN3, PIN7, and AUX1 in Arabidopsis thaliana [link]Paper   doi   link   bibtex   abstract  
Scots pine – panmixia and the elusive signal of genetic adaptation. Bruxaux, J., Zhao, W., Hall, D., Curtu, A. L., Androsiuk, P., Drouzas, A. D., Gailing, O., Konrad, H., Sullivan, A. R., Semerikov, V., & Wang, X. New Phytologist. February 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/nph.19563
Scots pine – panmixia and the elusive signal of genetic adaptation [link]Paper   doi   link   bibtex   abstract  
S1 basic leucine zipper transcription factors shape plant architecture by controlling C/N partitioning to apical and lateral organs. Kreisz, P., Hellens, A. M., Fröschel, C., Krischke, M., Maag, D., Feil, R., Wildenhain, T., Draken, J., Braune, G., Erdelitsch, L., Cecchino, L., Wagner, T. C., Ache, P., Mueller, M. J., Becker, D., Lunn, J. E., Hanson, J., Beveridge, C. A., Fichtner, F., Barbier, F. F., & Weiste, C. Proceedings of the National Academy of Sciences, 121(7): e2313343121. February 2024. Publisher: Proceedings of the National Academy of Sciences
S1 basic leucine zipper transcription factors shape plant architecture by controlling C/N partitioning to apical and lateral organs [link]Paper   doi   link   bibtex   abstract  
PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 localizes to the Golgi. Fuchs, P., Feixes-Prats, E., Arruda, P., Feitosa-Araújo, E., Fernie, A. R, Grefen, C., Lichtenauer, S., Linka, N., de Godoy Maia, I., Meyer, A. J, Schilasky, S., Sweetlove, L. J, Wege, S., Weber, A. P M, Millar, A H., Keech, O., Florez-Sarasa, I., Barreto, P., & Schwarzländer, M. Plant Physiology, 194(2): 623–628. February 2024.
PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 localizes to the Golgi [link]Paper   doi   link   bibtex   abstract  
Whole-genome resequencing facilitates the development of a 50K single nucleotide polymorphism genotyping array for Scots pine (Pinus sylvestris L.) and its transferability to other pine species. Estravis Barcala, M., van der Valk, T., Chen, Z., Funda, T., Chaudhary, R., Klingberg, A., Fundova, I., Suontama, M., Hallingbäck, H., Bernhardsson, C., Nystedt, B., Ingvarsson, P. K., Sherwood, E., Street, N., Gyllensten, U., Nilsson, O., & Wu, H. X. The Plant Journal, 117(3): 944–955. 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.16535
Whole-genome resequencing facilitates the development of a 50K single nucleotide polymorphism genotyping array for Scots pine (Pinus sylvestris L.) and its transferability to other pine species [link]Paper   doi   link   bibtex   abstract  
Genomic basis of seed colour in quinoa inferred from variant patterns using extreme gradient boosting. Sandell, F. L., Holzweber, T., Street, N. R., Dohm, J. C., & Himmelbauer, H. Plant Biotechnology Journal. January 2024. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/pbi.14267
Genomic basis of seed colour in quinoa inferred from variant patterns using extreme gradient boosting [link]Paper   doi   link   bibtex   abstract  
eSoil: A low-power bioelectronic growth scaffold that enhances crop seedling growth. Oikonomou, V. K., Huerta, M., Sandéhn, A., Dreier, T., Daguerre, Y., Lim, H., Berggren, M., Pavlopoulou, E., Näsholm, T., Bech, M., & Stavrinidou, E. Proceedings of the National Academy of Sciences, 121(2): e2304135120. January 2024. Publisher: Proceedings of the National Academy of Sciences
eSoil: A low-power bioelectronic growth scaffold that enhances crop seedling growth [link]Paper   doi   link   bibtex   abstract  
Quantitative and qualitative saccharide analysis of North Atlantic brown seaweed by gas chromatography/mass spectrometry and infrared spectroscopy. Niemi, C., Takahashi, J., Gorzsás, A., & Gentili, F. G. International Journal of Biological Macromolecules, 254: 127870. January 2024.
Quantitative and qualitative saccharide analysis of North Atlantic brown seaweed by gas chromatography/mass spectrometry and infrared spectroscopy [link]Paper   doi   link   bibtex   abstract