BibBase https://bibbase.org/zotero/upscpub
generated by bibbase.org
  2021 (104)
Organic nitrogen nutrition: LHT1.2 protein from hybrid aspen (Populus tremula L. x tremuloides Michx) is a functional amino acid transporter and a homolog of Arabidopsis LHT1. Gratz, R., Ahmad, I., Svennerstam, H., Jämtgård, S., Love, J., Holmlund, M., Ivanov, R., & Ganeteg, U. Tree Physiology, 41(8): 1479–1496. August 2021.
doi   link   bibtex   abstract  
Killing two enemies with one stone? Genomics of resistance to two sympatric pathogens in Norway spruce. Capador-Barreto, H. D., Bernhardsson, C., Milesi, P., Vos, I., Lundén, K., Wu, H. X., Karlsson, B., Ingvarsson, P. K., Stenlid, J., & Elfstrand, M. Molecular Ecology, 30(18): 4433–4447. September 2021.
doi   link   bibtex   abstract  
Xyloglucan Remodeling Defines Auxin-Dependent Differential Tissue Expansion in Plants. Velasquez, S. M., Guo, X., Gallemi, M., Aryal, B., Venhuizen, P., Barbez, E., Dünser, K. A., Darino, M., Pĕnčík, A., Novák, O., Kalyna, M., Mouille, G., Benková, E., P Bhalerao, R., Mravec, J., & Kleine-Vehn, J. International Journal of Molecular Sciences, 22(17): 9222. August 2021.
doi   link   bibtex   abstract  
When to branch - seasonal control of shoot architecture in trees. Singh, R. K., Bhalerao, R. P., & Maurya, J. P. The FEBS journal. October 2021.
doi   link   bibtex   abstract  
Cell biology of the leaf epidermis: Fate specification, morphogenesis and coordination. Zuch, D. T, Doyle, S. M, Majda, M., Smith, R. S, Robert, S., & Torii, K. U The Plant Cell, (koab250). October 2021.
Cell biology of the leaf epidermis: Fate specification, morphogenesis and coordination [link]Paper   doi   link   bibtex   abstract  
An atlas of the Norway spruce needle seasonal transcriptome. Bag, P., Lihavainen, J., Delhomme, N., Riquelme, T., Robinson, K. M, & Jansson, S. The Plant Journal. October 2021.
An atlas of the Norway spruce needle seasonal transcriptome [link]Paper   doi   link   bibtex   abstract  
A network of stress-related genes regulates hypocotyl elongation downstream of selective auxin perception. Rigal, A., Doyle, S. M., Ritter, A., Raggi, S., Vain, T., O’Brien, J. A., Goossens, A., Pauwels, L., & Robert, S. Plant Physiology, 187(1): 430–445. September 2021.
A network of stress-related genes regulates hypocotyl elongation downstream of selective auxin perception [link]Paper   doi   link   bibtex   abstract  
MADS-box transcription factors MADS11 and DAL1 interact to mediate the vegetative-to-reproductive transition in pine. Ma, J., Chen, X., Song, Y., Zhang, G., Zhou, X., Que, S., Mao, F., Pervaiz, T., Lin, J., Li, Y., Li, W., Wu, H. X., & Niu, S. Plant Physiology, 187(1): 247–262. September 2021.
MADS-box transcription factors MADS11 and DAL1 interact to mediate the vegetative-to-reproductive transition in pine [link]Paper   doi   link   bibtex   abstract  
Belowground resource utilization in monocultures and mixtures of Scots pine and Norway spruce. Lutter, R., Henriksson, N., Lim, H., Blaško, R., Magh, R., Näsholm, T., Nordin, A., Lundmark, T., & Marshall, J. D. Forest Ecology and Management, 500: 119647. November 2021.
Belowground resource utilization in monocultures and mixtures of Scots pine and Norway spruce [link]Paper   doi   link   bibtex   abstract  
Potassium transporter TRH1/KUP4 contributes to distinct auxin-mediated root system architecture responses. Templalexis, D., Tsitsekian, D., Liu, C., Daras, G., Šimura, J., Moschou, P., Ljung, K., Hatzopoulos, P., & Rigas, S. Plant Physiology, (kiab472). October 2021.
Potassium transporter TRH1/KUP4 contributes to distinct auxin-mediated root system architecture responses [link]Paper   doi   link   bibtex   abstract  
GIGANTEA influences leaf senescence in trees in two different ways. Fataftah, N., Bag, P., André, D., Lihavainen, J., Zhang, B., Ingvarsson, P. K, Nilsson, O., & Jansson, S. Plant Physiology, (kiab439). September 2021.
GIGANTEA influences leaf senescence in trees in two different ways [link]Paper   doi   link   bibtex   abstract  
Small-scale sequencing enables quality assessment of Ribo-Seq data: an example from Arabidopsis cell culture. Mahboubi, A., Delhomme, N., Häggström, S., & Hanson, J. Plant Methods, 17(1): 92. August 2021.
Small-scale sequencing enables quality assessment of Ribo-Seq data: an example from Arabidopsis cell culture [link]Paper   doi   link   bibtex   abstract  
Protocol development for somatic embryogenesis, SSR markers and genetic modification of Stipagrostis pennata (Trin.) De Winter. Asadi-Aghbolaghi, M., Dedicova, B., Ranade, S. S., Le, K., Sharifzadeh, F., Omidi, M., & Egertsdotter, U. Plant Methods, 17(1): 70. June 2021.
Protocol development for somatic embryogenesis, SSR markers and genetic modification of Stipagrostis pennata (Trin.) De Winter [link]Paper   doi   link   bibtex   abstract  
Metabolic Profiling of Plasma in Patients with Irritable Bowel Syndrome after a 4-Week Starch- and Sucrose-Reduced Diet. Stenlund, H., Nilholm, C., Chorell, E., Roth, B., D’Amato, M., & Ohlsson, B. Metabolites, 11(7): 440. July 2021.
Metabolic Profiling of Plasma in Patients with Irritable Bowel Syndrome after a 4-Week Starch- and Sucrose-Reduced Diet [link]Paper   doi   link   bibtex   abstract  
Leveraging breeding programs and genomic data in Norway spruce (Picea abies L. Karst) for GWAS analysis. Chen, Z., Zan, Y., Milesi, P., Zhou, L., Chen, J., Li, L., Cui, B., Niu, S., Westin, J., Karlsson, B., García-Gil, M. R., Lascoux, M., & Wu, H. X. Genome Biology, 22(1): 179. June 2021.
Leveraging breeding programs and genomic data in Norway spruce (Picea abies L. Karst) for GWAS analysis [link]Paper   doi   link   bibtex   abstract  
Novel Microdialysis Technique Reveals a Dramatic Shift in Metabolite Secretion during the Early Stages of the Interaction between the Ectomycorrhizal Fungus Pisolithus microcarpus and Its Host Eucalyptus grandis. Plett, K. L., Buckley, S., Plett, J. M., Anderson, I. C., Lundberg-Felten, J., & Jämtgård, S. Microorganisms, 9(9): 1817. September 2021. Number: 9 Publisher: Multidisciplinary Digital Publishing Institute
Novel Microdialysis Technique Reveals a Dramatic Shift in Metabolite Secretion during the Early Stages of the Interaction between the Ectomycorrhizal Fungus Pisolithus microcarpus and Its Host Eucalyptus grandis [link]Paper   doi   link   bibtex   abstract  
Solubilization Method for Isolation of Photosynthetic Mega- and Super-complexes from Conifer Thylakoids. Bag, P., Schröder, W. P., Jansson, S., & Farci, D. Bio-protocol, 11(17): e4144–e4144. September 2021.
Solubilization Method for Isolation of Photosynthetic Mega- and Super-complexes from Conifer Thylakoids [link]Paper   link   bibtex   abstract  
Exploring the β-tubulin gene family in a benzimidazole-resistant Parascaris univalens population. Martin, F., Halvarsson, P., Delhomme, N., Höglund, J., & Tydén, E. International Journal for Parasitology: Drugs and Drug Resistance, 17: 84–91. December 2021.
Exploring the β-tubulin gene family in a benzimidazole-resistant Parascaris univalens population [link]Paper   doi   link   bibtex   abstract  
Organic nitrogen enhances nitrogen nutrition and early growth of Pinus sylvestris seedlings. Lim, H., Jämtgård, S., Oren, R., Gruffman, L., Kunz, S., & Näsholm, T. Tree Physiology, (tpab127). September 2021.
Organic nitrogen enhances nitrogen nutrition and early growth of Pinus sylvestris seedlings [link]Paper   doi   link   bibtex   abstract  
Towards understanding the biological foundations of perenniality. Li, Z., Lathe, R. S., Li, J., He, H., & Bhalerao, R. P. Trends in Plant Science. September 2021.
Towards understanding the biological foundations of perenniality [link]Paper   doi   link   bibtex   abstract  
Saccharification Potential of Transgenic Greenhouse- and Field-Grown Aspen Engineered for Reduced Xylan Acetylation. Pramod, S., Gandla, M. L., Derba-Maceluch, M., Jönsson, L. J., Mellerowicz, E. J., & Winestrand, S. Frontiers in Plant Science, 12: 1722. 2021.
Saccharification Potential of Transgenic Greenhouse- and Field-Grown Aspen Engineered for Reduced Xylan Acetylation [link]Paper   doi   link   bibtex   abstract  
Mobile forms of carbon in trees: metabolism and transport. Dominguez, P. G., & Niittylä, T. Tree Physiology, (tpab123). September 2021.
Mobile forms of carbon in trees: metabolism and transport [link]Paper   doi   link   bibtex   abstract  
Variation in non-target traits in genetically modified hybrid aspens does not exceed natural variation. Robinson, K. M., Möller, L., Bhalerao, R. P., Hertzberg, M., Nilsson, O., & Jansson, S. New Biotechnology, 64: 27–36. September 2021.
Variation in non-target traits in genetically modified hybrid aspens does not exceed natural variation [link]Paper   doi   link   bibtex   abstract  
Perturbations in plant energy homeostasis prime lateral root initiation via SnRK1-bZIP63-ARF19 signaling. Muralidhara, P., Weiste, C., Collani, S., Krischke, M., Kreisz, P., Draken, J., Feil, R., Mair, A., Teige, M., Müller, M. J., Schmid, M., Becker, D., Lunn, J. E., Rolland, F., Hanson, J., & Dröge-Laser, W. Proceedings of the National Academy of Sciences, 118(37). September 2021. Publisher: National Academy of Sciences Section: Biological Sciences
Perturbations in plant energy homeostasis prime lateral root initiation via SnRK1-bZIP63-ARF19 signaling [link]Paper   doi   link   bibtex   abstract  
How retrograde signaling is intertwined with the evolution of photosynthetic eukaryotes. Calderon, R. H., & Strand, Å. Current Opinion in Plant Biology, 63: 102093. August 2021.
doi   link   bibtex   abstract  
High-resolution model of Arabidopsis Photosystem II reveals the structural consequences of digitonin-extraction. Graça, A. T., Hall, M., Persson, K., & Schröder, W. P. Scientific Reports, 11(1): 15534. July 2021. Bandiera_abtest: a Cc_license_type: cc_by Cg_type: Nature Research Journals Number: 1 Primary_atype: Research Publisher: Nature Publishing Group Subject_term: Biochemistry;Plant sciences;Structural biology Subject_term_id: biochemistry;plant-sciences;structural-biology
High-resolution model of Arabidopsis Photosystem II reveals the structural consequences of digitonin-extraction [link]Paper   doi   link   bibtex   abstract  
Light Harvesting in Fluctuating Environments: Evolution and Function of Antenna Proteins across Photosynthetic Lineage. Bag, P. Plants, 10(6): 1184. June 2021. Number: 6 Publisher: Multidisciplinary Digital Publishing Institute
Light Harvesting in Fluctuating Environments: Evolution and Function of Antenna Proteins across Photosynthetic Lineage [link]Paper   doi   link   bibtex   abstract  
Broadening the roles of UDP-glycosyltransferases in auxin homeostasis and plant development. Mateo-Bonmatí, E., Casanova-Sáez, R., Šimura, J., & Ljung, K. The New Phytologist. July 2021.
doi   link   bibtex   abstract  
Chromosome-scale assembly and evolution of the tetraploid Salvia splendens (Lamiaceae) genome. Jia, K., Liu, H., Zhang, R., Xu, J., Zhou, S., Jiao, S., Yan, X., Tian, X., Shi, T., Luo, H., Li, Z., Bao, Y., Nie, S., Guo, J., Porth, I., El-Kassaby, Y. A., Wang, X., Chen, C., Van de Peer, Y., Zhao, W., & Mao, J. Horticulture Research, 8(1): 1–15. September 2021.
Chromosome-scale assembly and evolution of the tetraploid Salvia splendens (Lamiaceae) genome [link]Paper   doi   link   bibtex   abstract  
PopulusPtERF85 Balances Xylem Cell Expansion and Secondary Cell Wall Formation in Hybrid Aspen. Seyfferth, C., Wessels, B. A., Vahala, J., Kangasjärvi, J., Delhomme, N., Hvidsten, T. R., Tuominen, H., & Lundberg-Felten, J. Cells, 10(8): 1971. August 2021.
PopulusPtERF85 Balances Xylem Cell Expansion and Secondary Cell Wall Formation in Hybrid Aspen [link]Paper   doi   link   bibtex   abstract  
Recursive partitioning to prioritize morphometric traits that separate Aspen specialist Chaitophorus aphid by species and stage. Raizada, R., Gaur, R. K., & Albrectsen, B. R. International Journal of Tropical Insect Science. August 2021.
Recursive partitioning to prioritize morphometric traits that separate Aspen specialist Chaitophorus aphid by species and stage [link]Paper   doi   link   bibtex   abstract  
The Transcriptional Landscape and Hub Genes Associated with Physiological Responses to Drought Stress in Pinus tabuliformis. Pervaiz, T., Liu, S., Uddin, S., Amjid, M. W., Niu, S., & Wu, H. X. International Journal of Molecular Sciences, 22(17): 9604. January 2021.
The Transcriptional Landscape and Hub Genes Associated with Physiological Responses to Drought Stress in Pinus tabuliformis [link]Paper   doi   link   bibtex   abstract  
Modulation of Arabidopsis root growth by specialized triterpenes. Bai, Y., Fernández‐Calvo, P., Ritter, A., Huang, A. C., Morales‐Herrera, S., Bicalho, K. U., Karady, M., Pauwels, L., Buyst, D., Njo, M., Ljung, K., Martins, J. C., Vanneste, S., Beeckman, T., Osbourn, A., Goossens, A., & Pollier, J. New Phytologist, 230(1): 228–243. April 2021.
Modulation of Arabidopsis root growth by specialized triterpenes [link]Paper   doi   link   bibtex  
Genomic Predictions With Nonadditive Effects Improved Estimates of Additive Effects and Predictions of Total Genetic Values in Pinus sylvestris. Calleja-Rodriguez, A., Chen, Z., Suontama, M., Pan, J., & Wu, H. X. Frontiers in Plant Science, 12: 666820. 2021.
doi   link   bibtex   abstract  
Adaptive introgression facilitate adaptation to high latitudes in European aspen (Populus tremula L.). Rendón-Anaya, M., Wilson, J., Sveinsson, S., Fedorkov, A., Cottrell, J., Bailey, M. E. S., Ruņģis, D., Lexer, C., Jansson, S., Robinson, K. M., Street, N. R., & Ingvarsson, P. K. Molecular Biology and Evolution,msab229. July 2021.
doi   link   bibtex   abstract  
The Plastid-Localized AtFtsHi3 Pseudo-Protease of Arabidopsis thaliana Has an Impact on Plant Growth and Drought Tolerance. Mishra, L. S., Mishra, S., Caddell, D. F., Coleman-Derr, D., & Funk, C. Frontiers in Plant Science, 12: 694727. 2021.
doi   link   bibtex   abstract  
UV-B-induced molecular mechanisms of stress physiology responses in the major northern Chinese conifer Pinus tabuliformis Carr. Xu, J., Nie, S., Xu, C., Liu, H., Jia, K., Zhou, S., Zhao, W., Zhou, X., El-Kassaby, Y. A., Wang, X., Porth, I., & Mao, J. Tree Physiology, 41(7): 1247–1263. July 2021.
doi   link   bibtex   abstract  
Jasmonate inhibits adventitious root initiation through repression of CKX1 and activation of RAP2.6L transcription factor in Arabidopsis. Dob, A., Lakehal, A., Novak, O., & Bellini, C. Journal of Experimental Botany, (erab358). July 2021.
Jasmonate inhibits adventitious root initiation through repression of CKX1 and activation of RAP2.6L transcription factor in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Survival and growth of Scots pine (Pinus sylvestris) seedlings in north Sweden: effects of planting position and arginine phosphate addition. Häggström, B., Domevscik, M., Öhlund, J., & Nordin, A. Scandinavian Journal of Forest Research, 0(0): 1–11. July 2021. Publisher: Taylor & Francis _eprint: https://doi.org/10.1080/02827581.2021.1957999
Survival and growth of Scots pine (Pinus sylvestris) seedlings in north Sweden: effects of planting position and arginine phosphate addition [link]Paper   doi   link   bibtex   abstract  
Haplotype-resolved genome assembly and allele-specific gene expression in cultivated ginger. Cheng, S., Jia, K., Liu, H., Zhang, R., Li, Z., Zhou, S., Shi, T., Ma, A., Yu, C., Gao, C., Cao, G., Zhao, W., Nie, S., Guo, J., Jiao, S., Tian, X., Yan, X., Bao, Y., Yun, Q., Wang, X., Porth, I., El-Kassaby, Y. A., Wang, X., Li, Z., Van de Peer, Y., & Mao, J. Horticulture Research, 8(1): 188. August 2021.
doi   link   bibtex   abstract  
Solving the Puzzle of Shape Regulation in Plant Epidermal Pavement Cells. Liu, S., Jobert, F., Rahneshan, Z., Doyle, S. M., & Robert, S. Annual Review of Plant Biology, 72(1): 525–550. June 2021.
Solving the Puzzle of Shape Regulation in Plant Epidermal Pavement Cells [link]Paper   doi   link   bibtex   abstract  
Pickle Recruits Retinoblastoma Related 1 to Control Lateral Root Formation in Arabidopsis. Ötvös, K., Miskolczi, P., Marhavý, P., Cruz-Ramírez, A., Benková, E., Robert, S., & Bakó, L. International Journal of Molecular Sciences, 22(8): 3862. January 2021. Number: 8 Publisher: Multidisciplinary Digital Publishing Institute
Pickle Recruits Retinoblastoma Related 1 to Control Lateral Root Formation in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Gene atlas of iron‐containing proteins in Arabidopsis thaliana. Przybyla‐Toscano, J., Boussardon, C., Law, S. R., Rouhier, N., & Keech, O. The Plant Journal, 106(1): 258–274. April 2021.
Gene atlas of iron‐containing proteins in Arabidopsis thaliana [link]Paper   doi   link   bibtex  
Growing in time: exploring the molecular mechanisms of tree growth. Singh, R. K., Bhalerao, R. P., & Eriksson, M. E. Tree Physiology, 41(4): 657–678. April 2021.
Growing in time: exploring the molecular mechanisms of tree growth [link]Paper   doi   link   bibtex   abstract  
Adventitious Rooting in Populus Species: Update and Perspectives. Bannoud, F., & Bellini, C. Frontiers in Plant Science, 12. 2021.
Adventitious Rooting in Populus Species: Update and Perspectives [link]Paper   doi   link   bibtex   abstract  
Arabidopsis bZIP11 Is a Susceptibility Factor During Pseudomonas syringae Infection. Prior, M. J., Selvanayagam, J., Kim, J., Tomar, M., Jonikas, M., Mudgett, M. B., Smeekens, S., Hanson, J., & Frommer, W. B. Molecular Plant-Microbe Interactions®, 34(4): 439–447. April 2021. Publisher: Scientific Societies
Arabidopsis bZIP11 Is a Susceptibility Factor During Pseudomonas syringae Infection [link]Paper   doi   link   bibtex   abstract  
A metabolomic study of Gomphrena agrestis in Brazilian Cerrado suggests drought-adaptive strategies on metabolism. Melo, G. A., Abreu, I. N., de Oliveira, M. B., Budzinski, I. G. F., Silva, L. V., Pimenta, M. A. S., & Moritz, T. Scientific Reports, 11(1): 12933. June 2021.
doi   link   bibtex   abstract  
Alterations in hormonal signals spatially coordinate distinct responses to DNA double-strand breaks in Arabidopsis roots. Takahashi, N., Inagaki, S., Nishimura, K., Sakakibara, H., Antoniadi, I., Karady, M., Ljung, K., & Umeda, M. Science Advances, 7(25): eabg0993. June 2021.
doi   link   bibtex   abstract  
Phytochrome B and PHYTOCHROME INTERACTING FACTOR8 modulate seasonal growth in trees. Ding, J., Zhang, B., Li, Y., André, D., & Nilsson, O. New Phytologist, n/a(n/a). March 2021. _eprint: https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.17350
Phytochrome B and PHYTOCHROME INTERACTING FACTOR8 modulate seasonal growth in trees [link]Paper   doi   link   bibtex   abstract  
Branched-chain amino acid metabolism is regulated by ERRα in primary human myotubes and is further impaired by glucose loading in type 2 diabetes. Sjögren, R. J. O., Rizo-Roca, D., Chibalin, A. V., Chorell, E., Furrer, R., Katayama, S., Harada, J., Karlsson, H. K. R., Handschin, C., Moritz, T., Krook, A., Näslund, E., & Zierath, J. R. Diabetologia. June 2021.
Branched-chain amino acid metabolism is regulated by ERRα in primary human myotubes and is further impaired by glucose loading in type 2 diabetes [link]Paper   doi   link   bibtex   abstract  
Moving towards multi-layered, mixed-species forests in riparian buffers will enhance their long-term function in boreal landscapes. Maher Hasselquist, E., Kuglerová, L., Sjögren, J., Hjältén, J., Ring, E., Sponseller, R. A., Andersson, E., Lundström, J., Mancheva, I., Nordin, A., & Laudon, H. Forest Ecology and Management, 493: 119254. August 2021.
Moving towards multi-layered, mixed-species forests in riparian buffers will enhance their long-term function in boreal landscapes [link]Paper   doi   link   bibtex   abstract  
ProkSeq for complete analysis of RNA-Seq data from prokaryotes. Mahmud, A K M F., Delhomme, N., Nandi, S., & Fällman, M. Bioinformatics, 37(1): 126–128. January 2021.
ProkSeq for complete analysis of RNA-Seq data from prokaryotes [link]Paper   doi   link   bibtex   abstract  
Insights into the role of alternative splicing in plant temperature response. Dikaya, V., El Arbi, N., Rojas-Murcia, N., Nardeli, S. M., Goretti, D., & Schmid, M. Journal of Experimental Botany. June 2021.
doi   link   bibtex   abstract  
Balanced forest tree improvement can be enhanced by selecting among many parents but maintaining balance among grandparents. Lindgren, D., Danusevičius, D., & Rosvall, O. . 2021.
Balanced forest tree improvement can be enhanced by selecting among many parents but maintaining balance among grandparents [link]Paper   link   bibtex   abstract  
Scale-up of Somatic Embryogenesis Plant Production of Hybrid Larch (Larix x eurolepis) Using Temporary Immersion Bioreactors. Le, K., & Egertsdotter, U. In Vitro Cellular & Developmental Biology-Animal, 57(SUPPL 1): S38–S39. June 2021. WOS:000655666400097
link   bibtex  
Divergent patterns between phenotypic and genetic variation in Scots pine. Hall, D., Olsson, J., Zhao, W., Kroon, J., Wennström, U., & Wang, X. Plant Communications, 2(1): 100139. January 2021.
Divergent patterns between phenotypic and genetic variation in Scots pine [link]Paper   doi   link   bibtex  
Stem girdling affects the onset of autumn senescence in aspen in interaction with metabolic signals. Lihavainen, J., Edlund, E., Björkén, L., Bag, P., Robinson, K. M., & Jansson, S. Physiologia Plantarum, 172(1): 201–217. May 2021.
Stem girdling affects the onset of autumn senescence in aspen in interaction with metabolic signals [link]Paper   doi   link   bibtex  
Iron–sulfur proteins in plant mitochondria: roles and maturation. Przybyla-Toscano, J., Christ, L., Keech, O., & Rouhier, N. Journal of Experimental Botany, 72(6): 2014–2044. March 2021.
Iron–sulfur proteins in plant mitochondria: roles and maturation [link]Paper   doi   link   bibtex   abstract  
Increased tree growth following long-term optimised fertiliser application indirectly alters soil properties in a boreal forest. Van Sundert, K., Linder, S., Marshall, J. D., Nordin, A., & Vicca, S. European Journal of Forest Research, 140(1): 241–254. February 2021.
Increased tree growth following long-term optimised fertiliser application indirectly alters soil properties in a boreal forest [link]Paper   doi   link   bibtex   abstract  
Development of a highly efficient 50K single nucleotide polymorphism genotyping array for the large and complex genome of Norway spruce ( Picea abies L. Karst) by whole genome resequencing and its transferability to other spruce species. Bernhardsson, C., Zan, Y., Chen, Z., Ingvarsson, P. K., & Wu, H. X. Molecular Ecology Resources, 21(3): 880–896. April 2021.
Development of a highly efficient 50K single nucleotide polymorphism genotyping array for the large and complex genome of Norway spruce ( <i>Picea abies</i> L. Karst) by whole genome resequencing and its transferability to other spruce species [link]Paper   doi   link   bibtex  
A fully assembled plastid‐encoded \textlessspan style="font-variant:small-caps;"\textgreaterRNA\textless/span\textgreater polymerase complex detected in etioplasts and proplastids in Arabidopsis. Ji, Y., Lehotai, N., Zan, Y., Dubreuil, C., Díaz, M. G., & Strand, Å. Physiologia Plantarum, 171(3): 435–446. March 2021.
A fully assembled plastid‐encoded \textlessspan style="font-variant:small-caps;"\textgreaterRNA\textless/span\textgreater polymerase complex detected in etioplasts and proplastids in Arabidopsis [link]Paper   doi   link   bibtex  
Long‐term nitrogen enrichment does not increase microbial phosphorus mobilization in a northern coniferous forest. Forsmark, B., Wallander, H., Nordin, A., & Gundale, M. J. Functional Ecology, 35(1): 277–287. January 2021.
Long‐term nitrogen enrichment does not increase microbial phosphorus mobilization in a northern coniferous forest [link]Paper   doi   link   bibtex  
Comparison of tension wood and normal wood for oxidative nanofibrillation and network characteristics. Jonasson, S., Bünder, A., Das, O., Niittylä, T., & Oksman, K. Cellulose, 28(2): 1085–1104. January 2021.
Comparison of tension wood and normal wood for oxidative nanofibrillation and network characteristics [link]Paper   doi   link   bibtex   abstract  
Balancing Breeding for Growth and Fecundity in Radiata Pine ( Pinus radiata D. Don) Breeding Programme. Wu, H. X., Ker, R., Chen, Z., & Ivkovic, M. Evolutionary Applications, 14(3): 834–846. March 2021.
Balancing Breeding for Growth and Fecundity in Radiata Pine ( <i>Pinus radiata</i> D. Don) Breeding Programme [link]Paper   doi   link   bibtex  
Studies of moss reproductive development indicate that auxin biosynthesis in apical stem cells may constitute an ancestral function for focal growth control. Landberg, K., Šimura, J., Ljung, K., Sundberg, E., & Thelander, M. New Phytologist, 229(2): 845–860. January 2021.
Studies of moss reproductive development indicate that auxin biosynthesis in apical stem cells may constitute an ancestral function for focal growth control [link]Paper   doi   link   bibtex  
Acclimation of leaf respiration temperature responses across thermally contrasting biomes. Zhu, L., Bloomfield, K. J., Asao, S., Tjoelker, M. G., Egerton, J. J., Hayes, L., Weerasinghe, L. K., Creek, D., Griffin, K. L., Hurry, V., Liddell, M., Meir, P., Turnbull, M. H., & Atkin, O. K. New Phytologist, 229(3): 1312–1325. February 2021.
Acclimation of leaf respiration temperature responses across thermally contrasting biomes [link]Paper   doi   link   bibtex  
Limited vertical CO2 transport in stems of mature boreal Pinus sylvestris trees. Tarvainen, L., Wallin, G., Linder, S., Näsholm, T., Oren, R., Ottosson Löfvenius, M., Räntfors, M., Tor-Ngern, P., & Marshall, J. D Tree Physiology, 41(1): 63–75. January 2021.
Limited vertical CO2 transport in stems of mature boreal <i>Pinus sylvestris</i> trees [link]Paper   doi   link   bibtex   abstract  
Sucrose synthase determines carbon allocation in developing wood and alters carbon flow at the whole tree level in aspen. Dominguez, P. G., Donev, E., Derba‐Maceluch, M., Bünder, A., Hedenström, M., Tomášková, I., Mellerowicz, E. J., & Niittylä, T. New Phytologist, 229(1): 186–198. January 2021.
Sucrose synthase determines carbon allocation in developing wood and alters carbon flow at the whole tree level in aspen [link]Paper   doi   link   bibtex  
Plant roots sense soil compaction through restricted ethylene diffusion. Pandey, B. K., Huang, G., Bhosale, R., Hartman, S., Sturrock, C. J., Jose, L., Martin, O. C., Karady, M., Voesenek, L. A. C. J., Ljung, K., Lynch, J. P., Brown, K. M., Whalley, W. R., Mooney, S. J., Zhang, D., & Bennett, M. J. Science, 371(6526): 276–280. January 2021.
Plant roots sense soil compaction through restricted ethylene diffusion [link]Paper   doi   link   bibtex   abstract  
Diurnal in vivo xylem sap glucose and sucrose monitoring using implantable organic electrochemical transistor sensors. Diacci, C., Abedi, T., Lee, J. W., Gabrielsson, E. O., Berggren, M., Simon, D. T., Niittylä, T., & Stavrinidou, E. iScience, 24(1): 101966. January 2021.
Diurnal in vivo xylem sap glucose and sucrose monitoring using implantable organic electrochemical transistor sensors [link]Paper   doi   link   bibtex  
Best practices in plant cytometry. Galbraith, D., Loureiro, J., Antoniadi, I., Bainard, J., Bureš, P., Cápal, P., Castro, M., Castro, S., Čertner, M., Čertnerová, D., Chumová, Z., Doležel, J., Giorgi, D., Husband, B. C., Kolář, F., Koutecký, P., Kron, P., Leitch, I. J., Ljung, K., Lopes, S., Lučanová, M., Lucretti, S., Ma, W., Melzer, S., Molnár, I., Novák, O., Poulton, N., Skalický, V., Sliwinska, E., Šmarda, P., Smith, T. W., Sun, G., Talhinhas, P., Tárnok, A., Temsch, E. M., Trávníček, P., & Urfus, T. Cytometry Part A, 99(4): 311–317. April 2021.
Best practices in plant cytometry [link]Paper   doi   link   bibtex  
New fluorescent auxin probes visualise tissue‐specific and subcellular distributions of auxin in Arabidopsis. Pařízková, B., Žukauskaitė, A., Vain, T., Grones, P., Raggi, S., Kubeš, M. F., Kieffer, M., Doyle, S. M., Strnad, M., Kepinski, S., Napier, R., Doležal, K., Robert, S., & Novák, O. New Phytologist, 230(2): 535–549. April 2021.
New fluorescent auxin probes visualise tissue‐specific and subcellular distributions of auxin in Arabidopsis [link]Paper   doi   link   bibtex  
External Mechanical Cues Reveal a Katanin-Independent Mechanism behind Auxin-Mediated Tissue Bending in Plants. Baral, A., Aryal, B., Jonsson, K., Morris, E., Demes, E., Takatani, S., Verger, S., Xu, T., Bennett, M., Hamant, O., & Bhalerao, R. P. Developmental Cell, 56(1): 67–80.e3. January 2021.
External Mechanical Cues Reveal a Katanin-Independent Mechanism behind Auxin-Mediated Tissue Bending in Plants [link]Paper   doi   link   bibtex  
Auxin Metabolism in Plants. Casanova-Sáez, R., Mateo-Bonmatí, E., & Ljung, K. Cold Spring Harbor Perspectives in Biology, 13(3): a039867. March 2021.
Auxin Metabolism in Plants [link]Paper   doi   link   bibtex  
Function of the pseudo phosphotransfer proteins has diverged between rice and Arabidopsis. Vaughan‐Hirsch, J., Tallerday, E. J., Burr, C. A., Hodgens, C., Boeshore, S. L., Beaver, K., Melling, A., Sari, K., Kerr, I. D., Šimura, J., Ljung, K., Xu, D., Liang, W., Bhosale, R., Schaller, G. E., Bishopp, A., & Kieber, J. J. The Plant Journal, 106(1): 159–173. April 2021.
Function of the pseudo phosphotransfer proteins has diverged between rice and Arabidopsis [link]Paper   doi   link   bibtex  
Candidate regulators and target genes of drought stress in needles and roots of Norway spruce. Haas, J. C, Vergara, A., Serrano, A. R, Mishra, S., Hurry, V., & Street, N. R Tree Physiology,tpaa178. January 2021.
Candidate regulators and target genes of drought stress in needles and roots of Norway spruce [link]Paper   doi   link   bibtex   abstract  
Evaluation of parameters to characterise germination-competent mature somatic embryos of Norway spruce (Picea abies). Le, K., Weerasekara, A. B., Ranade, S. S., & Egertsdotter, E. U. Biosystems Engineering, 203: 55–59. March 2021.
Evaluation of parameters to characterise germination-competent mature somatic embryos of Norway spruce (Picea abies) [link]Paper   doi   link   bibtex  
Molecular signatures of local adaptation to light in Norway spruce. Ranade, S. S., & García-Gil, M. R. Planta, 253(2): 53. February 2021.
Molecular signatures of local adaptation to light in Norway spruce [link]Paper   doi   link   bibtex   abstract  
Magnesium Signaling in Plants. Kleczkowski, L. A., & Igamberdiev, A. U. International Journal of Molecular Sciences, 22(3): 1159. January 2021.
Magnesium Signaling in Plants [link]Paper   doi   link   bibtex   abstract  
European aspen with high compared to low constitutive tannin defenses grow taller in response to anthropogenic nitrogen enrichment. Bandau, F., Albrectsen, B. R., Robinson, K. M., & Gundale, M. J. Forest Ecology and Management, 487: 118985. May 2021.
European aspen with high compared to low constitutive tannin defenses grow taller in response to anthropogenic nitrogen enrichment [link]Paper   doi   link   bibtex  
Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce. Schneider, A. N., Sundh, J., Sundström, G., Richau, K., Delhomme, N., Grabherr, M., Hurry, V., & Street, N. R. mSystems, 6(1). February 2021.
Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce [link]Paper   doi   link   bibtex   abstract  
Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees. Gandla, M. L., Mähler, N., Escamez, S., Skotare, T., Obudulu, O., Möller, L., Abreu, I. N., Bygdell, J., Hertzberg, M., Hvidsten, T. R., Moritz, T., Wingsle, G., Trygg, J., Tuominen, H., & Jönsson, L. J. Biotechnology for Biofuels, 14(1): 43. December 2021.
Overexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees [link]Paper   doi   link   bibtex   abstract  
EARLY BUD-BREAK 1 and EARLY BUD-BREAK 3 control resumption of poplar growth after winter dormancy. Azeez, A., Zhao, Y. C., Singh, R. K., Yordanov, Y. S., Dash, M., Miskolczi, P., Stojkovič, K., Strauss, S. H., Bhalerao, R. P., & Busov, V. B. Nature Communications, 12(1): 1123. December 2021.
EARLY BUD-BREAK 1 and EARLY BUD-BREAK 3 control resumption of poplar growth after winter dormancy [link]Paper   doi   link   bibtex   abstract  
The BOP‐type co‐transcriptional regulator NODULE ROOT1 promotes stem secondary growth of the tropical Cannabaceae tree Parasponia andersonii. Shen, D., Holmer, R., Kulikova, O., Mannapperuma, C., Street, N. R., Yan, Z., Maden, T., Bu, F., Zhang, Y., Geurts, R., & Magne, K. The Plant Journal,tpj.15242. April 2021.
The BOP‐type co‐transcriptional regulator NODULE ROOT1 promotes stem secondary growth of the tropical Cannabaceae tree <i>Parasponia andersonii</i> [link]Paper   doi   link   bibtex  
Histochemical Staining of Suberin in Plant Roots. Marhavy, P., & Siddique, S. BIO-PROTOCOL, 11(3). 2021.
Histochemical Staining of Suberin in Plant Roots [link]Paper   doi   link   bibtex  
The mycorrhizal tragedy of the commons. Henriksson, N., Franklin, O., Tarvainen, L., Marshall, J., Lundberg‐Felten, J., Eilertsen, L., & Näsholm, T. Ecology Letters, 24(6): 1215–1224. June 2021.
The mycorrhizal tragedy of the commons [link]Paper   doi   link   bibtex  
Annulohypoxylon sp. strain MUS1, an endophytic fungus isolated from Taxus wallichiana Zucc., produces taxol and other bioactive metabolites. Gauchan, D. P., Vélëz, H., Acharya, A., Östman, J. R., Lundén, K., Elfstrand, M., & García-Gil, M. R. 3 Biotech, 11(3): 152. March 2021.
Annulohypoxylon sp. strain MUS1, an endophytic fungus isolated from Taxus wallichiana Zucc., produces taxol and other bioactive metabolites [link]Paper   doi   link   bibtex  
The chemical compound ‘Heatin’ stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1‐subfamily of nitrilases. Woude, L., Piotrowski, M., Klaasse, G., Paulus, J. K., Krahn, D., Ninck, S., Kaschani, F., Kaiser, M., Novák, O., Ljung, K., Bulder, S., Verk, M., Snoek, B. L., Fiers, M., Martin, N. I., Hoorn, R. A. L., Robert, S., Smeekens, S., & Zanten, M. The Plant Journal,tpj.15250. May 2021.
The chemical compound ‘Heatin’ stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1‐subfamily of nitrilases [link]Paper   doi   link   bibtex  
miRNA Mediated Regulation and Interaction between Plants and Pathogens. Yang, X., Zhang, L., Yang, Y., Schmid, M., & Wang, Y. International Journal of Molecular Sciences, 22(6): 2913. March 2021.
miRNA Mediated Regulation and Interaction between Plants and Pathogens [link]Paper   doi   link   bibtex   abstract  
Anthropogenic nitrogen enrichment increased the efficiency of belowground biomass production in a boreal forest. Forsmark, B., Nordin, A., Rosenstock, N. P., Wallander, H., & Gundale, M. J. Soil Biology and Biochemistry, 155: 108154. April 2021.
Anthropogenic nitrogen enrichment increased the efficiency of belowground biomass production in a boreal forest [link]Paper   doi   link   bibtex  
Mechanochemical feedback mediates tissue bending required for seedling emergence. Jonsson, K., Lathe, R. S., Kierzkowski, D., Routier-Kierzkowska, A., Hamant, O., & Bhalerao, R. P. Current Biology, 31(6): 1154–1164.e3. March 2021.
Mechanochemical feedback mediates tissue bending required for seedling emergence [link]Paper   doi   link   bibtex  
Mycobiomes of Young Beech Trees Are Distinguished by Organ Rather Than by Habitat, and Community Analyses Suggest Competitive Interactions Among Twig Fungi. Siddique, A. B., Biella, P., Unterseher, M., & Albrectsen, B. R. Frontiers in Microbiology, 12: 646302. April 2021.
Mycobiomes of Young Beech Trees Are Distinguished by Organ Rather Than by Habitat, and Community Analyses Suggest Competitive Interactions Among Twig Fungi [link]Paper   doi   link   bibtex   abstract  
SLI1 confers broad‐spectrum resistance to phloem‐feeding insects. Kloth, K. J., Shah, P., Broekgaarden, C., Ström, C., Albrectsen, B. R., & Dicke, M. Plant, Cell & Environment,pce.14064. May 2021.
SLI1 confers broad‐spectrum resistance to phloem‐feeding insects [link]Paper   doi   link   bibtex  
Pyrophosphate as an alternative energy currency in plants. Igamberdiev, A. U., & Kleczkowski, L. A. Biochemical Journal, 478(8): 1515–1524. April 2021.
Pyrophosphate as an alternative energy currency in plants [link]Paper   doi   link   bibtex   abstract  
Life stage-specific inbreeding depression in long-lived Pinaceae species depends on population connectivity. Ahlinder, J., Giles, B. E., & García-Gil, M. R. Scientific Reports, 11(1): 8834. December 2021.
Life stage-specific inbreeding depression in long-lived Pinaceae species depends on population connectivity [link]Paper   doi   link   bibtex   abstract  
The Effect of High Lignin Content on Oxidative Nanofibrillation of Wood Cell Wall. Jonasson, S., Bünder, A., Berglund, L., Hertzberg, M., Niittylä, T., & Oksman, K. Nanomaterials, 11(5): 1179. April 2021.
The Effect of High Lignin Content on Oxidative Nanofibrillation of Wood Cell Wall [link]Paper   doi   link   bibtex   abstract  
Metabolomic Study of Heterotrophically Grown Chlorella sp. Isolated from Wastewater in Northern Sweden. Nzayisenga, J. C., & Sellstedt, A. Molecules, 26(9): 2410. April 2021.
Metabolomic Study of Heterotrophically Grown Chlorella sp. Isolated from Wastewater in Northern Sweden [link]Paper   doi   link   bibtex   abstract  
Effects of Arabidopsis wall associated kinase mutations on ESMERALDA1 and elicitor induced ROS. Kohorn, B. D., Greed, B. E., Mouille, G., Verger, S., & Kohorn, S. L. PLOS ONE, 16(5): e0251922. May 2021.
Effects of Arabidopsis wall associated kinase mutations on ESMERALDA1 and elicitor induced ROS [link]Paper   doi   link   bibtex   abstract  
Elongation of wood fibers combines features of diffuse and tip growth. Majda, M., Kozlova, L., Banasiak, A., Derba‐Maceluch, M., Iashchishyn, I. A., Morozova‐Roche, L. A., Smith, R. S., Gorshkova, T., & Mellerowicz, E. J. New Phytologist,nph.17468. May 2021.
Elongation of wood fibers combines features of diffuse and tip growth [link]Paper   doi   link   bibtex  
Sucrose-dependent production of biomass and low-caloric steviol glycosides in adventitious root cultures of Stevia rebaudiana (Bert.). Ahmad, N., Rab, A., Sajid, M., Ahmad, N., Fazal, H., Ali, M., & Egertsdotter, U. Industrial Crops and Products, 164: 113382. June 2021.
Sucrose-dependent production of biomass and low-caloric steviol glycosides in adventitious root cultures of Stevia rebaudiana (Bert.) [link]Paper   doi   link   bibtex  
Fluorescence activated cell sorting—A selective tool for plant cell isolation and analysis. Antoniadi, I., Skalický, V., Sun, G., Ma, W., Galbraith, D. W., Novák, O., & Ljung, K. Cytometry Part A,cyto.a.24461. May 2021.
Fluorescence activated cell sorting—A selective tool for plant cell isolation and analysis [link]Paper   doi   link   bibtex  
In silico characterization of putative gene homologues involved in somatic embryogenesis suggests that some conifer species may lack LEC2, one of the key regulators of initiation of the process. Ranade, S. S., & Egertsdotter, U. BMC Genomics, 22(1): 392. December 2021.
In silico characterization of putative gene homologues involved in somatic embryogenesis suggests that some conifer species may lack LEC2, one of the key regulators of initiation of the process [link]Paper   doi   link   bibtex   abstract  
Dynamics of Auxin and Cytokinin Metabolism during Early Root and Hypocotyl Growth in Theobroma cacao. Mboene Noah, A., Casanova-Sáez, R., Makondy Ango, R. E., Antoniadi, I., Karady, M., Novák, O., Niemenak, N., & Ljung, K. Plants, 10(5): 967. May 2021.
Dynamics of Auxin and Cytokinin Metabolism during Early Root and Hypocotyl Growth in Theobroma cacao [link]Paper   doi   link   bibtex   abstract  
Epigenetic Regulation of Temperature Responses – Past Successes and Future Challenges. Pandey, S. P., Benstein, R. M, Wang, Y., & Schmid, M. Journal of Experimental Botany,erab248. May 2021.
Epigenetic Regulation of Temperature Responses – Past Successes and Future Challenges [link]Paper   doi   link   bibtex   abstract