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  2011 (100)
The Arabidopsis YUCCA1 Flavin Monooxygenase Functions in the Indole-3-Pyruvic Acid Branch of Auxin Biosynthesis. Stepanova, A. N., Yun, J., Robles, L. M., Novak, O., He, W., Guo, H., Ljung, K., & Alonso, J. M. The Plant Cell, 23(11): 3961–3973. November 2011.
The Arabidopsis YUCCA1 Flavin Monooxygenase Functions in the Indole-3-Pyruvic Acid Branch of Auxin Biosynthesis [link]Paper   doi   link   bibtex   abstract  
A novel proteomic approach reveals a role for Mg-protoporphyrin IX in response to oxidative stress. Kindgren, P., Eriksson, M., Benedict, C., Mohapatra, A., Gough, S. P., Hansson, M., Kieselbach, T., & Strand, Å. Physiologia Plantarum, 141(4): 310–320. 2011. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1399-3054.2010.01440.x
A novel proteomic approach reveals a role for Mg-protoporphyrin IX in response to oxidative stress [link]Paper   doi   link   bibtex   abstract  
Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis. Ashelford, K., Eriksson, M. E., Allen, C. M, D'Amore, R., Johansson, M., Gould, P., Kay, S., Millar, A. J, Hall, N., & Hall, A. Genome Biology, 12(3): R28. 2011.
Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis [link]Paper   doi   link   bibtex  
Plant cell responses to cold are all about timing. Eriksson, M. E., & Webb, A. A. Current Opinion in Plant Biology, 14(6): 731–737. December 2011.
Plant cell responses to cold are all about timing [link]Paper   doi   link   bibtex  
Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen. Baba, K., Karlberg, A., Schmidt, J., Schrader, J., Hvidsten, T. R., Bakó, L., & Bhalerao, R. P. Proceedings of the National Academy of Sciences, 108(8): 3418–3423. February 2011.
Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen [link]Paper   doi   link   bibtex  
Conserved Arabidopsis ECHIDNA protein mediates trans-Golgi-network trafficking and cell elongation. Gendre, D., Oh, J., Boutte, Y., Best, J. G., Samuels, L., Nilsson, R., Uemura, T., Marchant, A., Bennett, M. J., Grebe, M., & Bhalerao, R. P. Proceedings of the National Academy of Sciences, 108(19): 8048–8053. May 2011.
Conserved Arabidopsis ECHIDNA protein mediates trans-Golgi-network trafficking and cell elongation [link]Paper   doi   link   bibtex  
Immunodetection of retinoblastoma-related protein and its phosphorylated form in interphase and mitotic alfalfa cells. Abraham, E., Miskolczi, P., Ayaydin, F., Yu, P., Kotogany, E., Bakó, L., Otvos, K., Horvath, G. V., & Dudits, D. Journal of Experimental Botany, 62(6): 2155–2168. March 2011.
Immunodetection of retinoblastoma-related protein and its phosphorylated form in interphase and mitotic alfalfa cells [link]Paper   doi   link   bibtex  
Importance of Post-Translational Modifications for Functionality of a Chloroplast-Localized Carbonic Anhydrase (CAH1) in Arabidopsis thaliana. Burén, S., Ortega-Villasante, C., Blanco-Rivero, A., Martínez-Bernardini, A., Shutova, T., Shevela, D., Messinger, J., Bakó, L., Villarejo, A., & Samuelsson, G. PLoS ONE, 6(6): e21021. June 2011.
Importance of Post-Translational Modifications for Functionality of a Chloroplast-Localized Carbonic Anhydrase (CAH1) in Arabidopsis thaliana [link]Paper   doi   link   bibtex  
Short Day–Mediated Cessation of Growth Requires the Downregulation of AINTEGUMENTALIKE1 Transcription Factor in Hybrid Aspen. Karlberg, A., Bakó, L., & Bhalerao, R. P. PLoS Genetics, 7(11): e1002361. November 2011.
Short Day–Mediated Cessation of Growth Requires the Downregulation of AINTEGUMENTALIKE1 Transcription Factor in Hybrid Aspen [link]Paper   doi   link   bibtex  
Developing breeding objectives for radiata pine structural wood production. I. Bioeconomic model and economic weights. Ivković, M., Wu, H. X., McRae, T. A., & Powell, M. B. Canadian Journal of Forest Research. February 2011. Publisher: NRC Research Press Ottawa, Canada
Developing breeding objectives for radiata pine structural wood production. I. Bioeconomic model and economic weights [link]Paper   doi   link   bibtex   abstract  
Efficiency of early selection for rotation-aged growth and wood density traits in Pinus radiata. Li, L., & Wu, H. X. Canadian Journal of Forest Research. February 2011. Publisher: NRC Research Press Ottawa, Canada
Efficiency of early selection for rotation-aged growth and wood density traits in Pinus radiata [link]Paper   doi   link   bibtex   abstract  
Somatic embryogenesis for plant production of Abies lasiocarpa. Kvaalen, H., Daehlen, O. G., Rognstad, A. T., Grønstad, B., & Egertsdotter, U. Canadian Journal of Forest Research. February 2011. Publisher: NRC Research Press Ottawa, Canada
Somatic embryogenesis for plant production of Abies lasiocarpa [link]Paper   doi   link   bibtex   abstract  
The conserved mobility of mitochondria during leaf senescence reflects differential regulation of the cytoskeletal components in Arabidopsis thaliana. Keech, O. Plant Signaling & Behavior, 6(1): 147–150. January 2011. Publisher: Taylor & Francis _eprint: https://doi.org/10.4161/psb.6.1.14307
The conserved mobility of mitochondria during leaf senescence reflects differential regulation of the cytoskeletal components in Arabidopsis thaliana [link]Paper   doi   link   bibtex   abstract  
The conserved mobility of mitochondria during leaf senescence reflects differential regulation of the cytoskeletal components in Arabidopsis thaliana. Keech, O. Plant Signaling & Behavior, 6(1): 147–150. January 2011.
The conserved mobility of mitochondria during leaf senescence reflects differential regulation of the cytoskeletal components in <i>Arabidopsis thaliana</i> [link]Paper   doi   link   bibtex  
Inheritance of spiral grain in the juvenile core of Pinus radiata. Gapare, W., Hathorn, A., Kain, D., Matheson, C., & Wu, H. Canadian Journal of Forest Research. December 2011. Publisher: NRC Research Press Ottawa, Canada
Inheritance of spiral grain in the juvenile core of Pinus radiata [link]Paper   doi   link   bibtex   abstract  
Performance differences among ex situ native-provenance collections of Pinus radiata D. Don. 1: potential for infusion into breeding populations in Australia and New Zealand. Gapare, W. J., Baltunis, B. S., Ivković, M., Low, C. B., Jefferson, P., & Wu, H. X. Tree Genetics & Genomes, 7(2): 409–419. April 2011.
Performance differences among ex situ native-provenance collections of Pinus radiata D. Don. 1: potential for infusion into breeding populations in Australia and New Zealand [link]Paper   doi   link   bibtex  
Unveiling the Casparian strip. Grebe, M. Nature, 473(7347): 294–295. May 2011. Number: 7347 Publisher: Nature Publishing Group
Unveiling the Casparian strip [link]Paper   doi   link   bibtex   abstract  
Mass Spectrometry Based Metabolomics to Identify Potential Biomarkers for Resistance in Barley against Fusarium Head Blight (Fusarium graminearum). Kumaraswamy, K. G., Kushalappa, A. C., Choo, T. M., Dion, Y., & Rioux, S. Journal of Chemical Ecology, 37(8): 846–856. August 2011.
Mass Spectrometry Based Metabolomics to Identify Potential Biomarkers for Resistance in Barley against Fusarium Head Blight (Fusarium graminearum) [link]Paper   doi   link   bibtex   abstract  
Xyloglucan endo-Transglycosylase-Mediated Xyloglucan Rearrangements in Developing Wood of Hybrid Aspen. Nishikubo, N., Takahashi, J., Roos, A. A., Derba-Maceluch, M., Piens, K., Brumer, H., Teeri, T. T., Stålbrand, H., & Mellerowicz, E. J. Plant Physiology, 155(1): 399–413. January 2011.
Xyloglucan endo-Transglycosylase-Mediated Xyloglucan Rearrangements in Developing Wood of Hybrid Aspen [link]Paper   doi   link   bibtex   abstract  
Disease-Related Changes in the Cerebrospinal Fluid Metabolome in Amyotrophic Lateral Sclerosis Detected by GC/TOFMS. Wuolikainen, A., Moritz, T., Marklund, S. L., Antti, H., & Andersen, P. M. PLOS ONE, 6(4): e17947. April 2011. Publisher: Public Library of Science
Disease-Related Changes in the Cerebrospinal Fluid Metabolome in Amyotrophic Lateral Sclerosis Detected by GC/TOFMS [link]Paper   doi   link   bibtex   abstract  
Density and wood biomass development in whole-tree analyses of Scots pine, and aspects on heritability estimates. Fries, A., & Mörling, T. Silvae Genetica, 60: 224–232. June 2011.
doi   link   bibtex   abstract  
Strigolactone signaling is required for auxin-dependent stimulation of secondary growth in plants. Agusti, J., Herold, S., Schwarz, M., Sanchez, P., Ljung, K., Dun, E. A., Brewer, P. B., Beveridge, C. A., Sieberer, T., Sehr, E. M., & Greb, T. Proceedings of the National Academy of Sciences, 108(50): 20242–20247. December 2011. Publisher: National Academy of Sciences Section: Biological Sciences
Strigolactone signaling is required for auxin-dependent stimulation of secondary growth in plants [link]Paper   doi   link   bibtex   abstract  
Agrobacterium tumefaciens: From crown gall tumors to genetic transformation. Păcurar, D. I., Thordal-Christensen, H., Păcurar, M. L., Pamfil, D., Botez, C., & Bellini, C. Physiological and Molecular Plant Pathology, 76(2): 76–81. August 2011.
Agrobacterium tumefaciens: From crown gall tumors to genetic transformation [link]Paper   doi   link   bibtex  
Structural Studies of β-Carbonic Anhydrase from the Green Alga Coccomyxa: Inhibitor Complexes with Anions and Acetazolamide. Huang, S., Hainzl, T., Grundström, C., Forsman, C., Samuelsson, G., & Sauer-Eriksson, A. E. PLoS ONE, 6(12): e28458. December 2011.
Structural Studies of β-Carbonic Anhydrase from the Green Alga Coccomyxa: Inhibitor Complexes with Anions and Acetazolamide [link]Paper   doi   link   bibtex  
Reduced Expression of the SHORT-ROOT Gene Increases the Rates of Growth and Development in Hybrid Poplar and Arabidopsis. Wang, J., Andersson-Gunnerås, S., Gaboreanu, I., Hertzberg, M., Tucker, M. R., Zheng, B., Leśniewska, J., Mellerowicz, E. J., Laux, T., Sandberg, G., & Jones, B. PLoS ONE, 6(12): e28878. December 2011.
Reduced Expression of the SHORT-ROOT Gene Increases the Rates of Growth and Development in Hybrid Poplar and Arabidopsis [link]Paper   doi   link   bibtex  
Initiation of somatic embryogenesis from immature zygotic embryos of Oocarpa pine (Pinus oocarpa Schiede ex Schlectendal). Lara-Chavez, A., Flinn, B. S., & Egertsdotter, U. Tree Physiology, 31(12): 1422–1422. December 2011.
Initiation of somatic embryogenesis from immature zygotic embryos of Oocarpa pine (Pinus oocarpa Schiede ex Schlectendal) [link]Paper   doi   link   bibtex  
Classification of microarrays; synergistic effects between normalization, gene selection and machine learning. Önskog, J., Freyhult, E., Landfors, M., Rydén, P., & Hvidsten, T. R BMC Bioinformatics, 12(1): 390. 2011.
Classification of microarrays; synergistic effects between normalization, gene selection and machine learning [link]Paper   doi   link   bibtex  
Photosynthetic growth despite a broken Q-cycle. Malnoë, A., Wollman, F., de Vitry, C., & Rappaport, F. Nature Communications, 2(1): 301. September 2011.
Photosynthetic growth despite a broken Q-cycle [link]Paper   doi   link   bibtex  
Cytokinin Modulates Endocytic Trafficking of PIN1 Auxin Efflux Carrier to Control Plant Organogenesis. Marhavý, P., Bielach, A., Abas, L., Abuzeineh, A., Duclercq, J., Tanaka, H., Pařezová, M., Petrášek, J., Friml, J., Kleine-Vehn, J., & Benková, E. Developmental Cell, 21(4): 796–804. October 2011.
Cytokinin Modulates Endocytic Trafficking of PIN1 Auxin Efflux Carrier to Control Plant Organogenesis [link]Paper   doi   link   bibtex  
Genetic variation between and within ex-situ native-provenance collections of Pinus radiata D. Don planted in Australia and New Zealand. Bian, L., Gapare, W. J., Ivković, M., Jefferson, P., & Wu, H. X. Silvae Genetica, 60(1-6): 276–285. December 2011.
Genetic variation between and within <i>ex-situ</i> native-provenance collections of <i>Pinus radiata</i> D. Don planted in Australia and New Zealand [link]Paper   doi   link   bibtex   abstract  
Clusters of bioactive compounds target dynamic endomembrane networks in vivo. Drakakaki, G., Robert, S., Szatmari, A., Brown, M. Q., Nagawa, S., Damme, D. V., Leonard, M., Yang, Z., Girke, T., Schmid, S. L., Russinova, E., Friml, J., Raikhel, N. V., & Hicks, G. R. Proceedings of the National Academy of Sciences, 108(43): 17850–17855. October 2011. Publisher: National Academy of Sciences Section: Biological Sciences
Clusters of bioactive compounds target dynamic endomembrane networks in vivo [link]Paper   doi   link   bibtex   abstract  
Recycling, clustering, and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane. Kleine‐Vehn, J., Wabnik, K., Martinière, A., Łangowski, Ł., Willig, K., Naramoto, S., Leitner, J., Tanaka, H., Jakobs, S., Robert, S., Luschnig, C., Govaerts, W., W Hell, S., Runions, J., & Friml, J. Molecular Systems Biology, 7(1): 540. January 2011.
Recycling, clustering, and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane [link]Paper   doi   link   bibtex  
A common structural blueprint for plant UDP-sugar-producing pyrophosphorylases. Kleczkowski, L. A., Geisler, M., Fitzek, E., & Wilczynska, M. Biochemical Journal, 439(3): 375–381. November 2011.
A common structural blueprint for plant UDP-sugar-producing pyrophosphorylases [link]Paper   doi   link   bibtex   abstract  
Crystal structure of the TL29 protein from Arabidopsis thaliana: An APX homolog without peroxidase activity. Lundberg, E., Storm, P., Schröder, W. P., & Funk, C. Journal of Structural Biology, 176(1): 24–31. October 2011.
Crystal structure of the TL29 protein from Arabidopsis thaliana: An APX homolog without peroxidase activity [link]Paper   doi   link   bibtex  
Transcriptome profiling of Pinus radiata juvenile wood with contrasting stiffness identifies putative candidate genes involved in microfibril orientation and cell wall mechanics. Li, X., Wu, H. X, & Southerton, S. G BMC Genomics, 12(1): 480. December 2011.
Transcriptome profiling of Pinus radiata juvenile wood with contrasting stiffness identifies putative candidate genes involved in microfibril orientation and cell wall mechanics [link]Paper   doi   link   bibtex  
Expression, purification, crystallization and preliminary X-ray crystallographic studies of alkyl hydroperoxide reductase (AhpC) from the cyanobacterium Anabaena sp. PCC 7120. Mishra, Y., Hall, M., Chaurasia, N., Rai, L. C., Jansson, S., Schröder, W. P., & Sauer, U. H. Acta Crystallographica Section F Structural Biology and Crystallization Communications, 67(10): 1203–1206. October 2011.
Expression, purification, crystallization and preliminary X-ray crystallographic studies of alkyl hydroperoxide reductase (AhpC) from the cyanobacterium <i>Anabaena</i> sp. PCC 7120 [link]Paper   doi   link   bibtex  
Preparation of Stroma, Thylakoid Membrane, and Lumen Fractions from Arabidopsis thaliana Chloroplasts for Proteomic Analysis. Hall, M., Mishra, Y., & Schröder, W. P. In Jarvis, R. P., editor(s), Chloroplast Research in Arabidopsis, volume 775, pages 207–222. Humana Press, Totowa, NJ, 2011. Series Title: Methods in Molecular Biology
Preparation of Stroma, Thylakoid Membrane, and Lumen Fractions from Arabidopsis thaliana Chloroplasts for Proteomic Analysis [link]Paper   doi   link   bibtex  
Molecular Population Genetics of Elicitor-Induced Resistance Genes in European Aspen (Populus tremula L., Salicaceae). Bernhardsson, C., & Ingvarsson, P. K. PLoS ONE, 6(9): e24867. September 2011.
Molecular Population Genetics of Elicitor-Induced Resistance Genes in European Aspen (Populus tremula L., Salicaceae) [link]Paper   doi   link   bibtex  
Organelle Genetic Diversity and Phylogeography of Scots Pine (Pinus sylvestris L.). Floran, V., Sestras, R., & Garcia Gil, R. Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 39: 317–322. May 2011.
doi   link   bibtex   abstract  
UHPLC-ESI/TOFMS Determination of salicylate-like phenolic gycosides in Populus tremula leaves. Abreu, I., Ahnlund, M., Moritz, T., & Albrectsen, B. Journal of chemical ecology, 37: 857–70. August 2011.
doi   link   bibtex   abstract  
Magnesium and cell energetics in plants under anoxia. Igamberdiev, A., & Kleczkowski, L. Biochemical Journal, 437(3): 373–379. August 2011.
Magnesium and cell energetics in plants under anoxia [link]Paper   doi   link   bibtex   abstract  
Proper gibberellin localization in vascular tissue is required to control auxin-dependent leaf development and bud outgrowth in hybrid aspen: GA-dependent auxin transport in vascular tissue. Mauriat, M., Sandberg, L. G., & Moritz, T. The Plant Journal, 67(5): 805–816. September 2011.
Proper gibberellin localization in vascular tissue is required to control auxin-dependent leaf development and bud outgrowth in hybrid aspen: GA-dependent auxin transport in vascular tissue [link]Paper   doi   link   bibtex  
PIPKs are essential for rhizoid elongation and caulonemal cell development in the moss Physcomitrella patens: Physiological role of PpPIPKs. Saavedra, L., Balbi, V., Lerche, J., Mikami, K., Heilmann, I., & Sommarin, M. The Plant Journal, 67(4): 635–647. August 2011.
PIPKs are essential for rhizoid elongation and caulonemal cell development in the moss Physcomitrella patens: Physiological role of PpPIPKs [link]Paper   doi   link   bibtex  
Clustering of MS spectra for improved protein identification rate and screening for protein variants and modifications by MALDI-MS/MS. Granlund, I., Kieselbach, T., Alm, R., Schröder, W. P., & Emanuelsson, C. Journal of Proteomics, 74(8): 1190–1200. August 2011.
Clustering of MS spectra for improved protein identification rate and screening for protein variants and modifications by MALDI-MS/MS [link]Paper   doi   link   bibtex  
Bryophytes attenuate anthropogenic nitrogen inputs in boreal forests: BRYOPHYTES ATTENUATE NITROGEN DEPOSITION. Gundale, M. J., Deluca, T. H., & Nordin, A. Global Change Biology, 17(8): 2743–2753. August 2011.
Bryophytes attenuate anthropogenic nitrogen inputs in boreal forests: BRYOPHYTES ATTENUATE NITROGEN DEPOSITION [link]Paper   doi   link   bibtex  
Extraordinary μs–ms backbone dynamics in Arabidopsis thaliana peroxiredoxin Q. Ådén, J., Wallgren, M., Storm, P., Weise, C. F., Christiansen, A., Schröder, W. P., Funk, C., & Wolf-Watz, M. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 1814(12): 1880–1890. December 2011.
Extraordinary μs–ms backbone dynamics in Arabidopsis thaliana peroxiredoxin Q [link]Paper   doi   link   bibtex  
Auxin Control in the Formation of Adventitious Roots. Pop, T., Pamfil, D., & Bellini, C. Notulae Botanicae Horti Agrobotanici Cluj-Napoca, 39: 307–316. June 2011.
doi   link   bibtex   abstract  
A carbonic anhydrase inhibitor induces bicarbonate-reversible suppression of electron transfer in pea photosystem 2 membrane fragments. Shitov, A., Zharmukhamedov, S., Shutova, T., Allakhverdiev, S., Samuelsson, G., & Klimov, V. Journal of Photochemistry and Photobiology B: Biology, 104(1-2): 366–371. July 2011.
A carbonic anhydrase inhibitor induces bicarbonate-reversible suppression of electron transfer in pea photosystem 2 membrane fragments [link]Paper   doi   link   bibtex  
The mechanism of anthracene interaction with photosynthetic apparatus: A study using intact cells, thylakoid membranes and PS II complexes isolated from Chlamydomonas reinhardtii. Aksmann, A., Shutova, T., Samuelsson, G., & Tukaj, Z. Aquatic Toxicology, 104(3-4): 205–210. August 2011.
The mechanism of anthracene interaction with photosynthetic apparatus: A study using intact cells, thylakoid membranes and PS II complexes isolated from Chlamydomonas reinhardtii [link]Paper   doi   link   bibtex  
Ultra-structural organisation of cell wall polymers in normal and tension wood of aspen revealed by polarisation FTIR microspectroscopy. Olsson, A., Bjurhager, I., Gerber, L., Sundberg, B., & Salmén, L. Planta, 233(6): 1277–1286. June 2011.
Ultra-structural organisation of cell wall polymers in normal and tension wood of aspen revealed by polarisation FTIR microspectroscopy [link]Paper   doi   link   bibtex  
The potential of microdialysis to monitor organic and inorganic nitrogen compounds in soil. Inselsbacher, E., Öhlund, J., Jämtgård, S., Huss-Danell, K., & Näsholm, T. Soil Biology and Biochemistry, 43(6): 1321–1332. June 2011.
The potential of microdialysis to monitor organic and inorganic nitrogen compounds in soil [link]Paper   doi   link   bibtex  
High light stress and the one-helix LHC-like proteins of the cryptophyte Guillardia theta. Funk, C., Alami, M., Tibiletti, T., & Green, B. R. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1807(7): 841–846. July 2011.
High light stress and the one-helix LHC-like proteins of the cryptophyte Guillardia theta [link]Paper   doi   link   bibtex  
Cell-specific chemotyping and multivariate imaging by combined FT-IR microspectroscopy and orthogonal projections to latent structures (OPLS) analysis reveals the chemical landscape of secondary xylem: The chemical landscape of secondary xylem. Gorzsás, A., Stenlund, H., Persson, P., Trygg, J., & Sundberg, B. The Plant Journal, 66(5): 903–914. June 2011.
Cell-specific chemotyping and multivariate imaging by combined FT-IR microspectroscopy and orthogonal projections to latent structures (OPLS) analysis reveals the chemical landscape of secondary xylem: The chemical landscape of secondary xylem [link]Paper   doi   link   bibtex  
Monoubiquitin-dependent endocytosis of the IRON-REGULATED TRANSPORTER 1 (IRT1) transporter controls iron uptake in plants. Barberon, M., Zelazny, E., Robert, S., Conéjéro, G., Curie, C., Friml, J., & Vert, G. Proceedings of the National Academy of Sciences, 108(32): E450–E458. August 2011.
Monoubiquitin-dependent endocytosis of the IRON-REGULATED TRANSPORTER 1 (IRT1) transporter controls iron uptake in plants [link]Paper   doi   link   bibtex  
Transcriptome profiling of wood maturation in Pinus radiata identifies differentially expressed genes with implications in juvenile and mature wood variation. Li, X., Wu, H. X., & Southerton, S. G. Gene, 487(1): 62–71. November 2011.
Transcriptome profiling of wood maturation in Pinus radiata identifies differentially expressed genes with implications in juvenile and mature wood variation [link]Paper   doi   link   bibtex  
Mechanisms for shaping, orienting, positioning and patterning plant secondary cell walls. Pesquet, E., Korolev, A., Calder, G., & Lloyd, C. Plant signaling & behavior, 6: 843–9. June 2011.
doi   link   bibtex   abstract  
Auxin and cytokinin regulate each other’s levels via a metabolic feedback loop. Jones, B., & Ljung, K. Plant Signaling & Behavior, 6(6): 901–904. June 2011.
Auxin and cytokinin regulate each other’s levels via a metabolic feedback loop [link]Paper   doi   link   bibtex  
Arabidopsis as a model for wood formation. Zhang, J., Elo, A., & Helariutta, Y. Current Opinion in Biotechnology, 22(2): 293–299. April 2011.
Arabidopsis as a model for wood formation [link]Paper   doi   link   bibtex  
Spatial variation in local pollen flow and mating success in a Picea abies clone archive and their implications for a novel “breeding without breeding” strategy. Shimono, A., Wang, X., Torimaru, T., Lindgren, D., & Karlsson, B. Tree Genetics & Genomes, 7(3): 499–509. June 2011.
Spatial variation in local pollen flow and mating success in a Picea abies clone archive and their implications for a novel “breeding without breeding” strategy [link]Paper   doi   link   bibtex  
Cisplatin binds human copper chaperone Atox1 and promotes unfolding in vitro. Palm, M. E., Weise, C. F., Lundin, C., Wingsle, G., Nygren, Y., Bjorn, E., Naredi, P., Wolf-Watz, M., & Wittung-Stafshede, P. Proceedings of the National Academy of Sciences, 108(17): 6951–6956. April 2011.
Cisplatin binds human copper chaperone Atox1 and promotes unfolding in vitro [link]Paper   doi   link   bibtex  
Clathrin Mediates Endocytosis and Polar Distribution of PIN Auxin Transporters in Arabidopsis. Kitakura, S., Vanneste, S., Robert, S., Löfke, C., Teichmann, T., Tanaka, H., & Friml, J. The Plant Cell, 23(5): 1920–1931. May 2011.
Clathrin Mediates Endocytosis and Polar Distribution of PIN Auxin Transporters in <i>Arabidopsis</i> [link]Paper   doi   link   bibtex   abstract  
Decreased variation of forest understory vegetation is an effect of fertilisation in young stands of Picea abies. Hedwall, P., Brunet, J., Nordin, A., & Bergh, J. Scandinavian Journal of Forest Research, 26(S11): 46–55. June 2011. Publisher: Taylor & Francis _eprint: https://doi.org/10.1080/02827581.2011.564397
Decreased variation of forest understory vegetation is an effect of fertilisation in young stands of Picea abies [link]Paper   doi   link   bibtex   abstract  
The Arabidopsis thaliana Med25 mediator subunit integrates environmental cues to control plant development. Elfving, N., Davoine, C., Benlloch, R., Blomberg, J., Brännström, K., Müller, D., Nilsson, A., Ulfstedt, M., Ronne, H., Wingsle, G., Nilsson, O., & Björklund, S. Proceedings of the National Academy of Sciences, 108(20): 8245–8250. May 2011. Publisher: National Academy of Sciences Section: Biological Sciences
The Arabidopsis thaliana Med25 mediator subunit integrates environmental cues to control plant development [link]Paper   doi   link   bibtex   abstract  
The small CAB-like proteins of the cyanobacterium Synechocystis sp. PCC 6803: Their involvement in chlorophyll biogenesis for Photosystem II. Hernandez-Prieto, M. A., Tibiletti, T., Abasova, L., Kirilovsky, D., Vass, I., & Funk, C. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1807(9): 1143–1151. September 2011.
The small CAB-like proteins of the cyanobacterium Synechocystis sp. PCC 6803: Their involvement in chlorophyll biogenesis for Photosystem II [link]Paper   doi   link   bibtex  
UDP-Sugar Pyrophosphorylase: A New Old Mechanism for Sugar Activation. Kleczkowski, L. A., Decker, D., & Wilczynska, M. Plant Physiology, 156(1): 3–10. May 2011.
UDP-Sugar Pyrophosphorylase: A New Old Mechanism for Sugar Activation [link]Paper   doi   link   bibtex  
The Disulfide Proteome and Other Reactive Cysteine Proteomes: Analysis and Functional Significance. Lindahl, M., Mata-Cabana, A., & Kieselbach, T. Antioxidants & Redox Signaling, 14(12): 2581–2642. June 2011.
The Disulfide Proteome and Other Reactive Cysteine Proteomes: Analysis and Functional Significance [link]Paper   doi   link   bibtex  
Patterns of Plant Biomass Partitioning Depend on Nitrogen Source. Cambui, C. A., Svennerstam, H., Gruffman, L., Nordin, A., Ganeteg, U., & Näsholm, T. PLoS ONE, 6(4): e19211. April 2011.
Patterns of Plant Biomass Partitioning Depend on Nitrogen Source [link]Paper   doi   link   bibtex  
The sucrose‐regulated Arabidopsis transcription factor bZIP11 reprograms metabolism and regulates trehalose metabolism. Ma, J., Hanssen, M., Lundgren, K., Hernández, L., Delatte, T., Ehlert, A., Liu, C., Schluepmann, H., Dröge‐Laser, W., Moritz, T., Smeekens, S., & Hanson, J. New Phytologist, 191(3): 733–745. August 2011.
The sucrose‐regulated Arabidopsis transcription factor bZIP11 reprograms metabolism and regulates trehalose metabolism [link]Paper   doi   link   bibtex  
Diagnostic properties of metabolic perturbations in rheumatoid arthritis. Madsen, R. K, Lundstedt, T., Gabrielsson, J., Sennbro, C., Alenius, G., Moritz, T., Rantapää-Dahlqvist, S., & Trygg, J. Arthritis Research & Therapy, 13(1): R19. February 2011.
Diagnostic properties of metabolic perturbations in rheumatoid arthritis [link]Paper   doi   link   bibtex  
The relationship between different spectral forms of the protochlorophyllide oxidoreductase complex and the structural organisation of prolamellar bodies isolated from Zea mays. Selstam, E., Brain, A. P. R., & Williams, W. P. Photosynthesis Research, 108(1): 47–59. May 2011.
The relationship between different spectral forms of the protochlorophyllide oxidoreductase complex and the structural organisation of prolamellar bodies isolated from Zea mays [link]Paper   doi   link   bibtex  
Trehalose-6-phosphate: connecting plant metabolism and development. Ponnu, J., Wahl, V., & Schmid, M. Frontiers in Plant Science, 2: 70. 2011.
doi   link   bibtex   abstract  
Regulation of flowering time: all roads lead to Rome. Srikanth, A., & Schmid, M. Cellular and molecular life sciences: CMLS, 68(12): 2013–2037. June 2011.
doi   link   bibtex   abstract  
The control of developmental phase transitions in plants. Huijser, P., & Schmid, M. Development (Cambridge, England), 138(19): 4117–4129. October 2011.
doi   link   bibtex   abstract  
Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor. Moyroud, E., Minguet, E. G., Ott, F., Yant, L., Posé, D., Monniaux, M., Blanchet, S., Bastien, O., Thévenon, E., Weigel, D., Schmid, M., & Parcy, F. The Plant Cell, 23(4): 1293–1306. April 2011.
doi   link   bibtex   abstract  
RETRACTED: The AFB4 Auxin Receptor Is a Negative Regulator of Auxin Signaling in Seedlings. Greenham, K., Santner, A., Castillejo, C., Mooney, S., Sairanen, I., Ljung, K., & Estelle, M. Current Biology, 21(6): 520–525. March 2011.
RETRACTED: The AFB4 Auxin Receptor Is a Negative Regulator of Auxin Signaling in Seedlings [link]Paper   doi   link   bibtex  
Transporters in Arabidopsis roots mediating uptake of amino acids at naturally occurring concentrations. Svennerstam, H., Jämtgård, S., Ahmad, I., Huss‐Danell, K., Näsholm, T., & Ganeteg, U. New Phytologist, 191(2): 459–467. July 2011.
Transporters in Arabidopsis roots mediating uptake of amino acids at naturally occurring concentrations [link]Paper   doi   link   bibtex  
Partners in Time: EARLY BIRD Associates with ZEITLUPE and Regulates the Speed of the Arabidopsis Clock. Johansson, M., McWatters, H. G., Bakó, L., Takata, N., Gyula, P., Hall, A., Somers, D. E., Millar, A. J., & Eriksson, M. E. Plant Physiology, 155(4): 2108–2122. March 2011.
Partners in Time: EARLY BIRD Associates with ZEITLUPE and Regulates the Speed of the Arabidopsis Clock [link]Paper   doi   link   bibtex   abstract  
Out of the shade and into the light. Grebe, M. Nature Cell Biology, 13(4): 347–349. April 2011.
Out of the shade and into the light [link]Paper   doi   link   bibtex  
TFL2/LHP1 is involved in auxin biosynthesis through positive regulation of YUCCA genes: Positive regulation of YUCCA genes by TFL2. Rizzardi, K., Landberg, K., Nilsson, L., Ljung, K., & Sundås-Larsson, A. The Plant Journal, 65(6): 897–906. March 2011.
TFL2/LHP1 is involved in auxin biosynthesis through positive regulation of YUCCA genes: Positive regulation of YUCCA genes by TFL2 [link]Paper   doi   link   bibtex  
GENE FLOW AND SELECTION ON PHENOTYPIC PLASTICITY IN AN ISLAND SYSTEM OF RANA TEMPORARIA: GENE FLOW AND SELECTION ON PHENOTYPIC PLASTICITY. Lind, M. I., Ingvarsson, P. K., Johansson, H., Hall, D., & Johansson, F. Evolution, 65(3): 684–697. March 2011.
GENE FLOW AND SELECTION ON PHENOTYPIC PLASTICITY IN AN ISLAND SYSTEM OF RANA TEMPORARIA: GENE FLOW AND SELECTION ON PHENOTYPIC PLASTICITY [link]Paper   doi   link   bibtex  
Comparison of the role of gibberellins and ethylene in response to submergence of two lowland rice cultivars, Senia and Bomba. Dubois, V., Moritz, T., & García-Martínez, J. L. Journal of Plant Physiology, 168(3): 233–241. February 2011.
Comparison of the role of gibberellins and ethylene in response to submergence of two lowland rice cultivars, Senia and Bomba [link]Paper   doi   link   bibtex  
Fitness analyses of Arabidopsis thaliana mutants depleted of FtsH metalloproteases and characterization of three FtsH6 deletion mutants exposed to high light stress, senescence and chilling. Wagner, R., Aigner, H., Pružinská, A., Jänkänpää, H. J., Jansson, S., & Funk, C. New Phytologist, 191(2): 449–458. July 2011.
Fitness analyses of <i>Arabidopsis thaliana</i> mutants depleted of FtsH metalloproteases and characterization of three FtsH6 deletion mutants exposed to high light stress, senescence and chilling [link]Paper   doi   link   bibtex  
A Plant-Specific Transcription Factor IIB-Related Protein, pBRP2, Is Involved in Endosperm Growth Control. Cavel, E., Pillot, M., Pontier, D., Lahmy, S., Bies-Etheve, N., Vega, D., Grimanelli, D., & Lagrange, T. PLoS ONE, 6(2): e17216. February 2011.
A Plant-Specific Transcription Factor IIB-Related Protein, pBRP2, Is Involved in Endosperm Growth Control [link]Paper   doi   link   bibtex  
Pectin Methylesterase Is Induced in Arabidopsis upon Infection and Is Necessary for a Successful Colonization by Necrotrophic Pathogens. Raiola, A., Lionetti, V., Elmaghraby, I., Immerzeel, P., Mellerowicz, E. J., Salvi, G., Cervone, F., & Bellincampi, D. Molecular Plant-Microbe Interactions®, 24(4): 432–440. April 2011.
Pectin Methylesterase Is Induced in <i>Arabidopsis</i> upon Infection and Is Necessary for a Successful Colonization by Necrotrophic Pathogens [link]Paper   doi   link   bibtex   abstract  
Fluorescent in situ visualization of sterols in Arabidopsis roots. Boutté, Y., Men, S., & Grebe, M. Nature Protocols, 6(4): 446–456. April 2011.
Fluorescent in situ visualization of sterols in Arabidopsis roots [link]Paper   doi   link   bibtex  
Fructose sensitivity is suppressed in Arabidopsis by the transcription factor ANAC089 lacking the membrane-bound domain. Li, P., Wind, J. J., Shi, X., Zhang, H., Hanson, J., Smeekens, S. C., & Teng, S. Proceedings of the National Academy of Sciences, 108(8): 3436–3441. February 2011. Publisher: National Academy of Sciences Section: Biological Sciences
Fructose sensitivity is suppressed in Arabidopsis by the transcription factor ANAC089 lacking the membrane-bound domain [link]Paper   doi   link   bibtex   abstract  
Adaptive evolution of the Populus tremula photoperiod pathway: EVOLUTION OF THE PHOTOPERIOD PATHWAY IN POPULUS. Hall, D., Ma, X., & Ingvarsson, P. K. Molecular Ecology, 20(7): 1463–1474. April 2011.
Adaptive evolution of the Populus tremula photoperiod pathway: EVOLUTION OF THE PHOTOPERIOD PATHWAY IN POPULUS [link]Paper   doi   link   bibtex  
Temporal matching among diurnal photosynthetic patterns within the crown of the evergreen sclerophyll Olea europaea L.: Within-crown photosynthetic patterns in O. europaea. Granado-Yela, C., García-Verdugo, C., Carrillo, K., Rubio De Casas, R., Kleczkowski, L. A., & Balaguer, L. Plant, Cell & Environment, 34(5): 800–810. May 2011.
Temporal matching among diurnal photosynthetic patterns within the crown of the evergreen sclerophyll Olea europaea L.: Within-crown photosynthetic patterns in O. europaea [link]Paper   doi   link   bibtex  
Membrane-inlet mass spectrometry reveals a high driving force for oxygen production by photosystem II. Shevela, D., Beckmann, K., Clausen, J., Junge, W., & Messinger, J. Proceedings of the National Academy of Sciences, 108(9): 3602–3607. March 2011.
Membrane-inlet mass spectrometry reveals a high driving force for oxygen production by photosystem II [link]Paper   doi   link   bibtex  
Quantitative analysis of photosynthetic carbon metabolism in protoplasts and intact leaves of barley. Determination of carbon fluxes and pool sizes of metabolites in different cellular compartments. Keerberg, O., Ivanova, H., Keerberg, H., Pärnik, T., Talts, P., & Gardeström, P. Biosystems, 103(2): 291–301. February 2011.
Quantitative analysis of photosynthetic carbon metabolism in protoplasts and intact leaves of barley. Determination of carbon fluxes and pool sizes of metabolites in different cellular compartments [link]Paper   doi   link   bibtex  
SHORT-ROOT Regulates Primary, Lateral, and Adventitious Root Development in Arabidopsis. Lucas, M., Swarup, R., Paponov, I. A., Swarup, K., Casimiro, I., Lake, D., Peret, B., Zappala, S., Mairhofer, S., Whitworth, M., Wang, J., Ljung, K., Marchant, A., Sandberg, G., Holdsworth, M. J., Palme, K., Pridmore, T., Mooney, S., & Bennett, M. J. Plant Physiology, 155(1): 384–398. January 2011.
SHORT-ROOT Regulates Primary, Lateral, and Adventitious Root Development in Arabidopsis [link]Paper   doi   link   bibtex   abstract  
Microtubules, MAPs and Xylem Formation. Pesquet, E., & Lloyd, C. In Liu, B., editor(s), The Plant Cytoskeleton, volume 2, pages 277–306. Springer New York, New York, NY, 2011. Series Title: Advances in Plant Biology
Microtubules, MAPs and Xylem Formation [link]Paper   doi   link   bibtex  
A systems biology model of the regulatory network in Populusleaves reveals interacting regulators and conserved regulation. Street, N. R., Jansson, S., & Hvidsten, T. R. BMC Plant Biology, 11(1): 13. January 2011.
A systems biology model of the regulatory network in Populusleaves reveals interacting regulators and conserved regulation [link]Paper   doi   link   bibtex   abstract  
Recombinant Deg/HtrA proteases from Synechocystis sp. PCC 6803 differ in substrate specificity, biochemical characteristics and mechanism. Huesgen, P., Miranda, H., Lam, X., Perthold, M., Schuhmann, H., Adamska, I., & Funk, C. Biochemical Journal, 435(3): 733–742. May 2011.
Recombinant Deg/HtrA proteases from Synechocystis sp. PCC 6803 differ in substrate specificity, biochemical characteristics and mechanism [link]Paper   doi   link   bibtex   abstract  
Leaf respiration and alternative oxidase in field‐grown alpine grasses respond to natural changes in temperature and light. Searle, S. Y., Thomas, S., Griffin, K. L., Horton, T., Kornfeld, A., Yakir, D., Hurry, V., & Turnbull, M. H. New Phytologist, 189(4): 1027–1039. March 2011.
Leaf respiration and alternative oxidase in field‐grown alpine grasses respond to natural changes in temperature and light [link]Paper   doi   link   bibtex  
Ethylene stimulates tracheary element differentiation in Zinnia elegans cell cultures. Pesquet, E., & Tuominen, H. New Phytologist, 190(1): 138–149. April 2011.
Ethylene stimulates tracheary element differentiation in <i>Zinnia elegans</i> cell cultures [link]Paper   doi   link   bibtex  
Association genetics of complex traits in plants. Ingvarsson, P. K., & Street, N. R. New Phytologist, 189(4): 909–922. March 2011.
Association genetics of complex traits in plants [link]Paper   doi   link   bibtex  
Possible Effect From Shear Stress on Maturation of Somatic Embryos of Norway Spruce (Picea abies). Sun, H., Aidun, C. K., & Egertsdotter, U. Biotechnology and Bioengineering, 108(5): 1089–1099. May 2011.
Possible Effect From Shear Stress on Maturation of Somatic Embryos of Norway Spruce (Picea abies) [link]Paper   doi   link   bibtex  
The PsbW protein stabilizes the supramolecular organization of photosystem II in higher plants: PsbW needed for PSII supercomplexes. García-Cerdán, J. G., Kovács, L., Tóth, T., Kereïche, S., Aseeva, E., Boekema, E. J., Mamedov, F., Funk, C., & Schröder, W. P. The Plant Journal, 65(3): 368–381. February 2011.
The PsbW protein stabilizes the supramolecular organization of photosystem II in higher plants: PsbW needed for PSII supercomplexes [link]Paper   doi   link   bibtex  
Optimization of CO2 fixation in photosynthetic cells via thermodynamic buffering. Igamberdiev, A. U., & Kleczkowski, L. A. Biosystems, 103(2): 224–229. February 2011.
Optimization of CO2 fixation in photosynthetic cells via thermodynamic buffering [link]Paper   doi   link   bibtex